KEGG   Medicago truncatula (barrel medic): 11436782
Entry
11436782          CDS       T01716                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03020  RNA polymerase
mtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    11436782
  09124 Replication and repair
   03420 Nucleotide excision repair
    11436782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11436782
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11436782
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     11436782
  RNA polymerase III system
   RNA polymerase III
     11436782
  RNA polymerase I system
   RNA polymerase I
     11436782
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      11436782
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 11436782
NCBI-ProteinID: XP_003620635
UniProt: G7KPG4
LinkDB
Position
6:40569277..40572115
AA seq 208 aa
MVFTEEDITKLYRIRKTILQMLFDRNYLVDETQLTMSREDFIFKFGEHMKREQLEINTTH
RNNLSEKICVFFFDDAKLGVNIVRGIINRMLKENVDNGIMVCQNKLSPAARKAVAGMSSI
GSKRLEVFMEDELLVNITKHERVPPHQVLTDTEKKALLKRYTVKDTQLPKILTNDPVARY
YGLRRGQVVRIIRPSETAGTYITYRIAS
NT seq 627 nt   +upstreamnt  +downstreamnt
atggtgtttaccgaagaagacataacaaaactatacagaatccgcaaaaccattctccaa
atgctattcgacagaaactacctcgtcgacgaaacccaacttaccatgtctcgagaagat
ttcatcttcaaattcggcgaacacatgaaacgagaacagttagaaatcaacacaacacat
agaaacaacctatctgaaaaaatctgtgtgttcttctttgatgatgctaaacttggtgtt
aatattgttagaggtattattaataggatgttgaaggagaatgttgataatgggattatg
gtttgtcagaataaattatctcctgctgcgcgtaaagctgttgctggaatgagttcaatt
ggttctaagcggcttgaagtctttatggaggatgaactgctggtgaacataacaaagcac
gagcgtgtacctccacatcaggttctcaccgacactgagaagaaagccctgctcaagaga
tacactgtcaaagatactcagctacctaaaattttgacaaatgatcctgttgcgagatat
tatggactaaggcgtggacaagttgtcaggattatccggccaagtgagactgcaggaaca
tatattacataccgaattgcttcttga

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