Medicago truncatula (barrel medic): 11444522
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Entry
11444522 CDS
T01716
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
11444522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11444522
Enzymes [BR:
mtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
11444522
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
11444522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2635
Motif
Other DBs
NCBI-GeneID:
11444522
NCBI-ProteinID:
XP_003607990
UniProt:
G7JLA0
LinkDB
All DBs
Position
4:complement(41742411..41758334)
Genome browser
AA seq
1628 aa
AA seq
DB search
MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD
NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR
RASQLELILKGNISKAKSLGEIKLNETIDSVDDDDDDSQWSGAEQLGESWTSLQFSEAMS
VIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAKAADVQADEED
ITSGGAGNSNGNNQILSIKLVEQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQG
FGKKAGHSMFFLENIFVPPIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSD
AYYILRRWQDLQGSVNLLFDNKTSLRSQKDASGICQLLDKKEGIFRQKMMGKRVNYACRS
VISPDPYLAVNEIGIPPYFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTST
LRLQKDKSLRSSTSRRLQSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHK
PSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQY
VKPTSGDPIRALIQDHIVSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKV
LMSNSESEMFLFPPAIFKPEPLWTGKQVISALLCYITKGRPPFTVEKNAKIPSSFFKTQT
GEIKKHTKDTSRKKDELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILL
SALSRLFTNFLQMHGFTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENI
DPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISL
MTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFL
TALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQ
FHYGEDGVDVHQTSFINKFEALSINKELIYSNCCRQLDRSSPYINKLPDALKGKAENFIR
DFSSKQRNSSSMKEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAG
RGEMNVTLGIPRLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIES
MKVSVVPVAVKEGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIEN
HISLLARISGIKDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEEDGFDAQ
KSKQRATDEVDYDDGPEEETHDGEKSEDVEVSEDGKDDEDDNGVEVNGDDSDIEVNDSDK
NVTLEETSKSKKRKFEPASKKYDRRVYVKAGGMRFEIHFKFIGEPHILLAQIAQRTAEKV
CIQNFGKVGQCKAITCKESGVIYYGEDDSKRDDIPSSVKEKIPALQTSGIHFKTFWEMED
DLKVRYVYSNDVHAILKAYGVEAAKEVIIREVQNVFKSYGISVNIRHLMLIADFMTHSGS
YRPLTRSGIADSTSPFVKISYETASNFIVEAARHGQVDTLETPSSRICLGLPVKMGTGCI
DLIQKLEI
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgccaacgagggcgcaacgaatgccattgaatcggtggctttcagttttcta
accaatgaagagttacttaagagtagtcgcgtcaaggttaccgatacaaatctctgcaat
aacatcggtcatcctgttcgcggcggtttatatgatcctgctttcggtcctttactggac
aataggtctaattgtgaatcctgtggcatgtccaaagaccattgctcgggtcattttggt
catattgagctcgtttcccctgtctacaatcctttgatgttcctttttcttggcaaaatt
ctaaatagaacgtgtttctcttgccactattttagggctagtagggatgaggtgaaaagg
cgtgcgtcccaattggagctcattttgaaagggaatattagcaaggctaaaagtttaggt
gaaattaaactaaatgaaaccattgattcagttgatgatgatgatgatgatagccaatgg
agtggtgctgagcaactgggagaaagttggacctcccttcaattttccgaggcaatgtct
gttatatatgagtttctagcgaaggactacaagaagtgtctaaattgtggatgcatcagt
cctaaaattactaaaccaacctttggacgcttcaacgtgaaagctctctcatctgttcaa
gccagagcaaatgttatttcatcagccaaagctgcagatgttcaagccgatgaagaggat
attacctctggtggtgctggaaatagtaatggaaataatcaaatattgtccattaagctt
gttgagcaatcttcactttctggatctttgctaccctcgcaggttcaggaaatgataaag
cttttgtggaaaaatgaatctaggctgtgctcgcatatcagcgacattcaagatcaaggt
tttggaaagaaagccggtcactcaatgttctttctggaaaacattttcgttccgccaatc
aaattccgccccccattgaaagcgggcgataatgtggcggagcatcctcaaactgttctg
ttgagtaaggttttagagtccaacatatccttggcagatgcccatcgaaccaagtcagat
gcatattatattctaaggcggtggcaggatcttcagggatctgtaaacctcctatttgac
aataaaacttctctaagaagccaaaaagatgcttctggaatatgtcagttgctggacaag
aaggaaggcatctttcgccagaaaatgatgggaaaaagggttaattatgcatgccgctct
gtcatttcaccagatccttatttagcagtcaatgaaattgggattcccccatattttgct
ctaaggttaacatatcctgagagagtgactccttggaattcagccaagttaatggacgct
atcctaaatggtcctgacacccatccaggtgcgatactctatactgataaaacatcaaca
ctcaggcttcagaaagataagagtttacgttcttcaacatcaaggagattacaatcctca
agaggggttattatgcatcatgggaagatacatgaacatgaatttgaaggaaaagttgtg
tatcgtcacttgaaggatggcgatgtagtgcttgttaatcgacagccaacacttcataaa
cctagtataatggcccatgtagtgcgcgttctaaagggggagaaaacggtacgcatgcat
tatgcaaactgcagtacatacaatgctgattttgacggtgatgagattaatgttcatttt
ccacaagatgaaatttcacgtgctgaagcttacaatattgtaaatgccaacaaccaatat
gtgaagcctacaagtggtgatccaatcagagccttgattcaggatcatattgtaagtgct
gcacttctcacaaaaaaagacacctttttgagctgtcaagaattcaatcaacttctctac
agttctggtgtatccatgactgggatgggctctttttcttgcaaaccaggacagaaagtt
ttaatgtcaaactctgagagtgaaatgtttctgtttcctccagcaatattcaagccagag
ccgctgtggacaggaaaacaggttatcagtgcattgctatgctatatcactaaaggtcgc
ccaccatttaccgtagagaagaacgcaaaaatcccatctagtttttttaagactcaaacg
ggggaaataaaaaaacacactaaagatacatcaagaaagaaggatgagcttgaggataaa
ttgttgatatatagaaatgatttggtgcgcggtgtagttgataaggctcaatttggtgac
tatggaatggtgcatacagtgcaagagttttatggctcaaatactgctggcattcttctt
tcggcattaagtcggctgttcacaaactttttacagatgcatgggttcacttgtggggtt
gatgatcttctgataaaagtaggaaaagatagtgaaagactaaatcaacttgaaagctgc
gaggaaatcggtgacattgttcatcgtgaattcattggagtcatggagagtgaaaatata
gatccaatcacaatgcagttgaatgttgagaaaaaaatacgcagtaatggagaagctgcc
ataacatacttagataggaagatgataagtaatcttaactccagaactagctcaggggta
ttgaaggagctactatctaaaggatcattaaaaccctcaggaaaaaattggatttctctt
atgactacatctggagctaagggcagtatggtcaacttccagcagatatcttctcatctt
ggccaacaagagttggaaggaaaaagagtcccacgtatggtttctggaaagaccttacct
tgctttccatcatgggattgttcccccagagcaggagggttcatcattgatcggtttctt
acagctcttcgtccacaggaatattactttcattgtatggctggtcgagaaggattagtt
gacactgcagtcaaaacatctaggagtggttacctgcaaagatgtctaatgaaaaacctg
gagtctcttaaagtttgttatgatcatactgtccgtgattctgatgggtcaattattcag
tttcactatggagaagatggtgtggatgtccatcaaactagctttatcaacaaatttgaa
gcattgtcaattaataaagaattgatttacagcaactgttgccgtcagctagataggtct
agtccttatattaacaagttgcctgacgctcttaaaggaaaagcagaaaacttcattcgt
gatttttcttcaaaacagagaaattccagttcaatgaaagaagcagatttcctacaggtg
atggaacacaagtatgtctcaagtcttgctcaacccggtgagccagttggtgtgttagct
tctcagtctgttggagaaccagcaacacagatgactttgaatactttccaccttgctggt
cgaggtgaaatgaatgtcactctcggaattcctcgtttgcacgagatcgtggtggcagcc
agcaaaaacataaagactccctttatgacatgccccctgaggcccaacaaatctatggaa
gatgctattcgtcttgcagacaaaatgaaaaagattacagtagctgacataattgagagt
atgaaagtttctgttgtaccagtagctgtaaaagagggccgcatttgcagtatatataag
cttacaatgaagctgcataaacctaaacactatcccaaatacacggatgttacccttgaa
gactgggaggaaactctaagagttggctttgtgagggaattggaggatgcgattgaaaat
cacatttcattgctggctagaattagtggcataaaagattttcaaggcaaatcaaattct
tcaaatggtttagataatgatcatagcaatgaatcggcatccaaccaaaatggtcaaact
gatgatgacgacgaagttggtgatacagaggatgctgaggaagatggttttgatgctcaa
aagagtaaacaacgagctacggatgaggttgattacgatgatggtcctgaagaggaaaca
catgatggtgagaagtcagaggacgttgaagtctctgaggatggtaaagatgatgaagat
gacaatggtgttgaagtaaatggagatgacagtgatattgaagtaaatgacagtgataaa
aatgtgacacttgaagaaacttcaaaatctaaaaagagaaaatttgaacccgcgagcaaa
aaatatgaccggagagtttatgtgaaagccgggggaatgcgtttcgagatccactttaaa
tttattggtgaacctcacatattattggctcagattgctcagagaacagccgagaaggtt
tgtatccagaactttggtaaggttggccaatgtaaagctattacatgtaaagaaagtggc
gtaatctactatggtgaagatgatagtaaaagggatgatattccgtcatcagttaaagaa
aaaataccagcacttcaaacgtctggtatacatttcaaaacattttgggagatggaagat
gatctgaaagttaggtatgtttattcaaatgacgtgcatgctatactaaaagcctatggg
gtggaagcagccaaagaagtcatcatccgggaagtacaaaatgttttcaagtcttatggg
atatcggtaaacatcagacacttgatgcttattgctgactttatgacacattctggttcc
tatcgccctttgaccagatcggggatagcagattctacatccccttttgtcaaaatatct
tatgagacagcatccaacttcattgttgaagcggctcgtcatgggcaggtagacaccttg
gagactccttcttctagaatttgtctcggtttgccggtgaagatgggaactgggtgtatt
gacttgattcagaagctggaaatatga
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integrated database retrieval system
