KEGG   Medicago truncatula (barrel medic): 11444744
Entry
11444744          CDS       T01716                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03020  RNA polymerase
mtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    11444744
  09124 Replication and repair
   03420 Nucleotide excision repair
    11444744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    11444744
   03400 DNA repair and recombination proteins [BR:mtr03400]
    11444744
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     11444744
  RNA polymerase III system
   RNA polymerase III
     11444744
  RNA polymerase I system
   RNA polymerase I
     11444744
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      11444744
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 11444744
NCBI-ProteinID: XP_003625191
UniProt: A2Q3E0
LinkDB
Position
7:43498654..43501579
AA seq 145 aa
MADDDYEDIDMGYEEEPPEPEIEEGAEEEDPDNKNDDLDAEGEPIETEEKEDAAPVERPR
RTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLP
DGSYEDWGVDELIVEDSWKRQVGGD
NT seq 438 nt   +upstreamnt  +downstreamnt
atggccgacgatgactacgaagatatcgacatggggtacgaggaggagccaccagagcct
gaaattgaggaaggtgcagaggaggaggatcctgataacaagaacgatgacctagatgca
gaaggagaaccaattgaaactgaggaaaaggaagatgctgcaccggttgaacgtcccaga
agaacttccaaatatatgactaagtatgagcgcgctaggattctcggtactcgcgctctt
caaatcagtatgaatgcacctgtcatggtcgagttggagggggaaactgacccacttgag
attgccatgaaggagctacgagagcggaaaattccttttaccatccgtcgctacttgcct
gatggaagctatgaagattggggagttgatgagctgattgtggaagactcctggaagaga
caagtgggtggcgattga

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