KEGG   Medicago truncatula (barrel medic): 25480597
Entry
25480597          CDS       T01716                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2 isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    25480597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    25480597
Enzymes [BR:mtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     25480597
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     25480597
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 25480597
NCBI-ProteinID: XP_039684701
LinkDB
Position
8:37049346..37057691
AA seq 1186 aa
MEDHIGSSKDANIYTEMDIDLNDEDPSNAEILNELGEDMFKYFCKRASVMFFDQYGLISH
QINSYNQFITSGLQSAFDSFGDLTVTPGFDPSKKAVDEHYQYATVKFGNVTLERPKFWCG
EGNAQEMKMLPRHARLQRMTYASKVKVDVQLQVYVPKKVRSDKFKTGKEEYIDREIKLDE
TREITIGRLPVMVKSDLCWMSEAEKGDCEFDHGGYFLIKGAEKIFIAQEQVFLKRLWVSN
IPYWAVAFKSQMKRNRMVVKLVEGSTEGITNGEKLLTVYFLSVEIPVWILFFALGVTSDK
EIVDLIDYGESDGRIENILFASIREADDKCEAFRRGKNALLFLEERVKGVQFPPAESIDE
CFNMYVFPNIKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLEREIK
VHFAHARKRMGKALQRDLYGDRDVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRMERIS
GVVATLGRTNPLQTIAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVK
NLAVTGVVSTNVTESVLPQLFDCGMEELIDDTMTVLGKKDKVFLNGDWVGVCSDSTSFVA
ELRNRRRKNELPHQVEIKRDQYQQEVRILSDAGRILRPLLVVSNLLKIKGSKSEHKSFQS
LLDNGVIDLIGPEEEEDFKTAWGVQYLFGKERKSSVKYTHCELDMSFLLGLSCSLVPFAN
HDHARRVLYQSQKHSSQAIGFATTNPNIRVDALSHQLFYPQRPLFQTMTSDCLGKPGYLG
QNKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHTRSYKAEIENKE
SSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIIIGRCADSGTDHSIKL
KHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPF
TKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHR
AGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVAD
RKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGR
KIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINLKFETELC
NT seq 3561 nt   +upstreamnt  +downstreamnt
atggaggatcacataggttcaagcaaagacgctaacatctacactgaaatggacatcgac
ctcaacgatgaagatccatccaacgctgaaatcctcaacgaactcggcgaagatatgttc
aaatacttttgcaaaagagcttccgtcatgttcttcgatcaatacggtttaatcagtcac
caaatcaactcctataatcaattcatcacttctggtcttcaatccgcttttgattccttc
ggtgatctcactgttacgccgggttttgatccttctaagaaagctgttgatgaacattac
caatatgccacggttaagtttgggaatgttacgcttgaacgacctaagttttggtgtggt
gaagggaatgctcaagagatgaagatgcttccgagacatgctaggttacagaggatgact
tatgcttccaaagttaaagttgatgttcaacttcaggtatatgttccaaagaaggttcgg
agtgataagtttaagactgggaaagaagagtatattgatagagagatcaagttggatgag
acaagggaaataactattggtagactgcctgttatggtcaagtctgatctttgctggatg
agtgaagctgaaaaaggtgactgtgaatttgaccatggaggctacttcctgatcaagggt
gctgagaagatttttattgcacaagagcaagtatttctgaagaggctctgggtttcaaat
attccgtattgggctgttgctttcaagtcacaaatgaagagaaataggatggttgttaaa
ttggtggaaggttccacggagggaattacaaacggagagaagctgctcacagtatatttt
ttgtctgtcgagatacctgtatggatactgttttttgctcttggtgtcacgtcagataaa
gagattgtggatctcattgattatggagagtcagatggaagaattgaaaacattctcttt
gcatccatccgtgaggcagatgataaatgtgaagcatttcgtaggggaaagaacgctctt
cttttcttagaggaacgtgtaaaaggcgtgcagtttccacccgcagaatctattgacgag
tgctttaacatgtatgtttttccgaacattaaaggattaaaaagaaaggcaaggtacctg
gcttacatggtgaaggttcttctactagcgtatactggccgccgaaaaactgataacagg
gatgattttcgaaataagaggcttgagttggctggtgagctgctggagcgcgagattaaa
gtgcactttgcacatgctcggaagcgaatgggaaaggctctgcagagagacctttatgga
gatcgagatgttcgtcaaattgagcactatcttgacgcttccattattacaaatggtctc
caaagagcgttttctactggagcatggacacatcctttcaaaaggatggaaaggatatct
ggtgtggttgcaactcttgggcgaaccaatccattacaaaccattgctgaattaagaaga
acaaggcaacaagttcagtacacaggaaaggtcggggatgctagatacccgcatccttct
cactggggtaaggtttgtttcctttctaccccagatggtgaaaactgtggactggtaaaa
aatttggctgtcacaggagtagtaagtaccaatgtaactgaatccgtacttcctcagctg
ttcgattgtgggatggaagaacttattgatgatactatgactgttctggggaaaaaagac
aaagtcttcctaaatggggactgggttggagtttgttcagattccacatcatttgtagca
gagctacgaaatagaagacggaaaaatgagttgcctcatcaggtggaaatcaaaagagat
cagtatcaacaagaagtgcgcatattatctgatgcaggaaggattctccgtccactcttg
gttgttagtaatctgctcaagattaaaggatctaagtcggagcataaatctttccagtcc
ctattggataatggcgtgattgacctgattggtcctgaagaagaagaggacttcaagact
gcttggggtgttcagtatttgtttggcaaagagagaaaatcttccgtgaagtacacacat
tgtgaacttgatatgtcgttcttattgggtctaagctgttcacttgttccatttgcaaat
catgaccatgctaggagagtgttgtaccaatcccagaagcattcttctcaggctattggc
tttgctacgacaaacccaaatataagagtcgatgctttgtctcaccaactgttttatcca
caaagaccactctttcagacaatgacatctgattgtctcggaaaacctggatatcttggt
cagaataaagttgttccgaagtctgaattctataatgggcagaatgcaattgtggctgtc
aatgtacatctcggatataatcaagaagattccttggttatgaaccgtgcttctttgcaa
cgaggtatgttcagatctgagcatacaaggagttacaaagctgaaattgaaaataaggaa
tcttcagaaaagagaaagaagcctgaagacattgttaattttggaaagatacagagtaaa
attggtcgagttgatagccttgatgatgatggctttccatttgttggagcaaatttgcag
agtggcgatattatcatcgggcggtgtgctgattccgggacggaccatagtataaagcta
aagcacaccgaaaggggttatgttcaaaaggttgtgctgtcttcgaatgatgaggggaag
aattttgctgttgtttcgttaagacaggttagaagcccagttcttggagataagttctcc
agtatgcatggacagaagggtgttttgggttttctggaatctcaggaaaatttccccttc
acaaaacaaggcattgttcctgatattgttataaacccacatgcatttccctcacgacaa
actcctggacaactactagaggctgctttgggaaagggcatcgcttgtgttggttcactg
agaaatgctactcctttctccacttcctctgttgaagccattaccgaccagcttcataga
gctggcttttcaagatgggggaacgaacgagtatacaacgggaggaccggtgaaatggtc
cgatcactaatatttatgggcccaacattctaccagcgtctgcaccacatgtccgaagac
aaagtcaaattcaggaacaccggtccagttcacccgttgacccgacagcctgtcgctgac
aggaagcgatttggaggtatcaagtttggtgaaatggagcgtgattgcctgatagctcac
ggtgcatcagctaacttgtatgagcgcctcttcaccctgagtgattcatctcagatacac
atttgtagtaaatgcaagaatgttgcaaatgtgatcttgcgaccggtatctggtggacgg
aagattcgaggtccgtattgccgtttctgtgaatcagccgatgacattgttgtggcaagt
gttccatatggagcaaagttgttgtctcaggagctgttcagcatgggcattaatctcaaa
tttgaaactgagctttgctaa

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