Medicago truncatula (barrel medic): 25490723
Help
Entry
25490723 CDS
T01716
Name
(RefSeq) 4-coumarate--CoA ligase-like 1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00130
Ubiquinone and other terpenoid-quinone biosynthesis
mtr00940
Phenylpropanoid biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
mtr_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
25490723
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
25490723
Enzymes [BR:
mtr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
25490723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF2325
Motif
Other DBs
NCBI-GeneID:
25490723
NCBI-ProteinID:
XP_013460056
UniProt:
A0A072UWU0
LinkDB
All DBs
Position
3:26938271..26941739
Genome browser
AA seq
553 aa
AA seq
DB search
MGAYIENFEENEHIFCSQYSPVPVPENVTLPEFVLQNAELYGDKVAFVDAESGKGVTYNE
VVRDIHRFSKALRSLGLRKGNVVIVVLPNIVEYAIIALGIMDSGCVFSGANPASHTSEIK
KQVESADAKLIVTNSSSHEKVKSLGLPVIVLGDDNVEDAMNWNKLLEAGDRAGNDLKKEP
IHQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVTPEMIGQVTTLGLIPFFHIY
GITGICCATIRNKGKVVVMGKYDLKTFLNALITHEVTFAPIVPPIILGLVKNPIVDQFDL
SKLKLQAIMTAAAPLAPELLNSFEHKFPGVIVQEAYGLTEHSCITLTYAQKLSGSTHKNS
VGFILPNLEVKFIDPETGRSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTG
DIGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLPDEEAGEIP
AASVVLSKGAKESEEDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLVKEKMVEK
IKENNSLTKSNKF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctacatagaaaattttgaagagaatgagcacattttttgtagccaatattct
ccagttccggtacctgaaaatgtcacattgccggaatttgtgctccaaaatgctgaatta
tatggtgataaggttgcatttgtggatgctgagagtggaaaaggggtgacttataatgag
gttgtgagggatatacatagattttcaaaggctttaaggtctcttggtttgagaaaaggg
aatgttgtgattgttgtacttccaaatattgtagagtatgctattattgctttgggaatc
atggattctggttgtgtgttctcaggagctaatccagcttcacatacatctgaaattaag
aaacaagttgagtctgctgatgccaaattaattgtcacaaatagctcaagccatgaaaag
gtgaaaagtctagggctacctgttattgtcctaggagatgacaatgtggaagatgctatg
aactggaacaaacttcttgaagcaggagatagggcagggaatgatttaaagaaggaacca
attcaccaaaatgacctttgtgccatgccattttcatcaggcacaacaggaatgtcaaag
ggtgtaatgcttacacatagaaacctagtagcaaatctttgttctacactttttggtgta
acaccagaaatgattggtcaagtcaccacattagggttaattcccttttttcacatttat
ggcatcactggaatatgttgtgctactattaggaataaagggaaagtagtggtgatggga
aaatatgatttgaaaacatttttgaatgccttgattacacatgaagtcacatttgcacct
attgttccacctattattcttggattggttaaaaatcctattgttgatcaatttgatctt
agtaagcttaaacttcaagccattatgactgctgctgcaccacttgcacctgaattactt
aattcctttgaacataagttccctggtgttattgtccaagaggcatatggactaactgag
catagctgcattacacttacatatgcacaaaaattatctggaagtacacataaaaattcg
gttggtttcatccttccgaatttggaagtcaagtttattgatcctgaaacaggaagatcc
ctcccaaggaacacaccaggggaactttgtgtgagaagccaatgtgtaatgcaaggttat
tataaacaagtggatgagactgctcagactattgacaaaaatggatggcttcacactggt
gacataggattcatagatgatgaagaaaatgttttcattgttgatcgaattaaggaattg
atcaaatacaaaggcttccaagttgctcctgcagagttagaggctattttgctgtctcat
tcctcagttgaagatgcagctgttgtaccattaccagatgaagaagcaggggaaatccca
gctgcaagtgttgttttgagcaaaggtgcaaaagagagtgaagaggatattatgaactat
gttgcatcaaatgctgctcattacaagaaagtgagagtggttcactttgtggaagctata
ccaaaatcaccttctggtaaaataatgagaaggcttgtcaaagagaagatggtggaaaag
attaaggaaaataattccctaacaaaatctaacaaattttaa
DBGET
integrated database retrieval system