Mucilaginibacter celer: HYN43_021800
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Entry
HYN43_021800 CDS
T05668
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
muh
Mucilaginibacter celer
Brite
KEGG Orthology (KO) [BR:
muh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
muh03009
]
HYN43_021800 (rimO)
Enzymes [BR:
muh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYN43_021800 (rimO)
Ribosome biogenesis [BR:
muh03009
]
Prokaryotic type
ribosomal protein modification factors
HYN43_021800 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AYL97766
UniProt:
A0A494VQD9
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All DBs
Position
5285088..5286425
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AA seq
445 aa
AA seq
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MKTKEISRPSVKQVKPRVNVVTLGCSKNIYDSEILMGQLKGNQFDVVHEAEKVGKNDIIV
INTCGFIDNAKQESIDTILQYSELKEQGKVGKVIVTGCLSERYKPELEAEITNVDAYFGT
NDLQNLLATVGANYKHELIGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHLSSPM
EQLVEDAKKLAKNGTKELILIAQDLTYYGLDLYGKRNLDELLRRLSDVNGIEWIRLQYAY
PSGFPMEILDVMNERENICKYLDMPLQHITDNMLKSMRRGITKQKTIDIVNEIRDRVPGI
AMRTTLITGYPGETQQDFEEMAQWVEDTKFDRLGCFTYSHEEKTHAHSLVDDVPEEVKQE
RADAIMEIQQGISFDKNQEKIGNTYKVLIDKKDGGYFVGRTEFDSPEVDNEVLIDASVDY
ATIGSFVNVQINSAEDFDLYGQIVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaggaaatttcacgcccttcggtaaagcaagtcaaaccccgtgtaaacgtg
gttacgttaggctgctcaaaaaacatctacgattcggagatattgatggggcagttgaag
ggcaaccagtttgatgtggtgcatgaggccgagaaggtaggcaaaaatgatattatagta
attaatacctgtggctttattgataatgccaagcaggaatcgatagatactattctgcaa
tacagcgagcttaaagagcagggtaaagtaggtaaggtaattgtaaccggctgcttaagc
gaacgttacaaacccgagcttgaagccgagatcaccaatgttgatgcttacttcggcact
aacgatctgcaaaatttgttggctactgtaggggcaaattacaagcacgagttaatcggt
gagcgtttactaaccaccccatcgcattttgcttactttaaaattgccgaagggtgtaac
cgtccgtgctcgttttgtgctatcccgttgatgcgtggtaaacacctgagctcgccgatg
gagcaattggtggaggatgctaagaaactggctaagaacggcactaaggagttgattttg
atagctcaggatttaacctactacggtcttgatctttatggcaaacgtaatttggatgag
ttgcttcgccgtttatctgatgtgaatggtatcgagtggatcaggttgcaatatgcttac
ccttcaggtttcccgatggagattctggatgtgatgaacgagcgtgaaaacatctgcaaa
tacctggatatgccattacagcacattaccgataatatgctgaaatcgatgcgccgtggt
atcaccaagcaaaaaaccatcgatattgtgaacgaaattcgcgatcgtgtaccgggtatt
gccatgcgtactacgctgatcaccggctaccctggcgaaacccagcaggattttgaagag
atggcgcaatgggttgaggataccaaatttgaccgtttgggctgcttcacctactcccac
gaagaaaaaacgcatgcccatagtttggttgatgacgtacctgaagaagtgaaacaggaa
cgtgccgatgccatcatggaaattcagcaaggcatttcgtttgataaaaaccaggagaag
attggcaacacctataaagtgctgatcgataaaaaagacggcggttattttgttggccgc
accgaatttgattcgccagaggtagataatgaagtgttaattgatgccagcgttgattat
gcaaccattggaagctttgttaacgtacagattaacagcgccgaggactttgacctttat
ggacaaattgtaaaataa
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