Pseudoduganella umbonata: FCL38_16090
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Entry
FCL38_16090 CDS
T06138
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00053
Ascorbate and aldarate metabolism
mum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
FCL38_16090 (garD)
Enzymes [BR:
mum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
FCL38_16090 (garD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Chlorosome_CsmC
Motif
Other DBs
NCBI-ProteinID:
QCP11771
LinkDB
All DBs
Position
3890060..3891628
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AA seq
522 aa
AA seq
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MTASIPRRILMHANDNVAIVVNDGGLPAGTVFDDGLTLVEAVPQGHKVALADIAQGQSVL
RYNVSIGRAVRDIPKGSWVSEQLLEMPPARELDNLPIATVKVPPLEPLEGYTFQGYRNED
GTVGTRNILGITTTVQCVSGVVEFAVKRIKAELLPKYPNVDDVVGLEHTYGCGVAIDAPG
ANIPIRTIHNISKNPNFGGQAMVVSLGCEKLQPTRLFPANSIQIRRKDDTVATEPPVVCL
QDAGNVGFMSMVDSIMQTAEAQLEVLNRRQRVTCPASDLVVGVQCGGSDAFSGVTANPAV
GFATDLLVRAGATVMFSEVTEVRDGIDQLTSRAVNAEVAQEMIREMAWYDAYLTRGGVDR
SANTTPGNKKGGLSNIVEKAMGSIVKSGSVPISGVLSPGEKATTKGVKGLLYTATPASDF
ICGTLQLAAGMNLHVFTTGRGTPYGLAECPVIKVATRDDLARRWHDLMDVNAGRIATGEA
TIESVGWELFQLLLDTASGKKTWAEHWKLHNALVLFNPAPVT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgagcattccgcgccgtatcctcatgcacgccaacgacaacgtggcaatcgtc
gtcaacgatggcggcctgccggcgggcaccgttttcgatgacggccttacgctggtcgag
gccgtgccgcaaggccacaaggtggcgctggccgacatcgcgcagggccagagcgtgctg
cgctacaacgtttcgattggccgcgccgtgcgcgacattccgaaaggcagttgggtttcc
gagcagttgctggagatgccgccggcacgcgagctggacaacctgccgatcgccaccgtc
aaggtgccgccgctggaaccgctggaaggctatacgttccagggctaccgcaatgaagac
ggcacggtgggcacgcgcaatatcctcggcatcactacgaccgtgcagtgcgtttccggc
gtcgtcgaattcgcggtcaagcgcatcaaggccgagctgctgccgaagtacccgaacgtg
gacgacgtggtcggcctcgaacacacctatggctgcggcgtggcgatcgatgcgccgggg
gccaacatcccgatccgcacgatccacaacatcagcaagaatccgaacttcggcggccag
gcgatggtggtttcgctcggctgcgaaaagctgcagccgacccgcctgttcccggccaac
tcgatccagatccgccgcaaggacgacacggtggcgaccgagccgccggtggtctgcctg
caggacgccggcaacgtgggcttcatgtcgatggtcgactcgatcatgcagacggccgag
gcgcagctggaagtgctgaacaggcgccagcgcgtgacctgcccggcctccgacctggtg
gtcggcgtgcagtgcggcggcagcgatgcgttctccggcgtgaccgccaacccggccgtc
ggcttcgccaccgacctgctggtgcgcgccggcgccaccgtgatgttctcggaagtgacg
gaagtgcgcgacgggatcgaccagctgacctcgcgcgccgtcaatgccgaggtggcccag
gaaatgatccgcgagatggcgtggtacgacgcgtacctgacccgcggcggcgtcgaccgc
agcgccaacaccacgccgggcaacaagaaaggcggcctgtcgaacatcgtcgaaaaggcg
atgggctcgatcgtcaagtcgggcagcgtgccgatttcgggcgtgctgtcgccgggcgag
aaagccacgacgaagggcgtcaagggcctgctgtataccgccaccccggcatcggacttc
atctgcggcacgctgcagctggctgccggcatgaacctgcacgtgttcaccaccggccgc
ggcacgccatacggcctggccgaatgcccggtgatcaaggtggccacgcgcgacgacctg
gcgcgccgctggcacgacctgatggacgtgaacgcgggccgcatcgccacgggcgaggcg
accatcgaaagcgtgggctgggaactgttccagctgctgctcgataccgcgagcggcaag
aagacctgggccgagcactggaagctgcacaatgccctcgtcctgttcaacccggcgccg
gtgacctga
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