Pseudoduganella umbonata: FCL38_23635
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Entry
FCL38_23635 CDS
T06138
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mum
Pseudoduganella umbonata
Pathway
mum00906
Carotenoid biosynthesis
mum01100
Metabolic pathways
mum01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
FCL38_23635
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mum01006
]
FCL38_23635
Enzymes [BR:
mum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
FCL38_23635
Prenyltransferases [BR:
mum01006
]
Terpene biosynthesis
Squalene/phytoene synthase
FCL38_23635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
QCP13101
LinkDB
All DBs
Position
complement(5624891..5625883)
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AA seq
330 aa
AA seq
DB search
MSARDDGALLDHATNTINVGSKSFAAAARLFDPATRRSVLMLYAWCRHCDDVVDGQELGF
GSAAPTQDEAARHLAMLEDLTQRAYERETMTEPAFAAFQEVALRHAIQPRFAFDHLAGFA
MDVHGERYESLDDTLRYCYHVAGVVGLMMASIMGVKSETVLDHACDLGLAFQLTNIARDI
VDDAAIGRTYLPAQWLREAGIPPAEIALEKHRAALAGVAARLVDHAEPYYDSATVGIAAL
PLRSAWAIATARYVYRQIGIEVKRRGPRAWDERVGTSKAMKLWLLAKGGALALRSRFKPL
FRQPAARRAGLWQRPRAFAAGLGAARATVA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcgcgacgatggcgcattgctggaccatgcgaccaataccatcaacgtcggg
tcgaaaagcttcgccgccgcggcgcggctgttcgatcccgcgacgcggcgcagcgtgctg
atgctgtatgcatggtgccgccattgcgacgacgtggtcgacggccaggaactcggcttc
ggcagcgccgctccgacgcaggacgaagcggcgcggcacctcgccatgctggaggacctg
acgcagcgcgcctatgaacgcgagacgatgacggagccggccttcgcggccttccaggaa
gtggcgctgcgccacgcgatccagccccgcttcgcgttcgaccacctggccggcttcgcg
atggacgtgcatggcgagcgctacgaatcgctcgacgacacgctgcgctattgctaccac
gtggccggcgtggtgggtctgatgatggcctcgatcatgggggtgaaaagcgaaacggtg
ctggaccacgcctgcgacctggggctggcgttccagctgacgaacatcgcgcgcgacatt
gtcgacgacgccgccatcggacgcacctacctgccggcgcagtggctgcgcgaggcggga
atcccgcccgccgagatcgcgctggagaagcaccgcgcagccctggcgggagtggcggcc
cggctggtcgatcatgcggaaccctattacgactccgccaccgtgggcatcgccgcactg
ccgctgcgctcggcgtgggcgatcgccacggcgcgctatgtgtaccggcagatcggcatc
gaagtgaaacggcgcgggccgcgcgcctgggatgagcgggtgggcacgtcgaaggcgatg
aaactgtggctgctggcgaagggcggcgcgctcgcgctcaggtcccggttcaagcccctt
ttccggcagccggcggctcgtcgcgcagggttgtggcagcggccgcgtgcctttgcggcc
ggccttggtgcagcgcgtgcaactgtcgcttga
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