Meriones unguiculatus (Mongolian gerbil): 110540489
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Entry
110540489 CDS
T05884
Symbol
Scn11a
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mun04040
]
110540489 (Scn11a)
Ion channels [BR:
mun04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110540489 (Scn11a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
110540489
NCBI-ProteinID:
XP_021482934
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All DBs
Position
6:33027876..33095937
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AA seq
1771 aa
AA seq
DB search
MEDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIRKEKKKSKDKASTEPQPRPQLDLKASR
KLPKLYGDIPRELVAKPLEDLDPFYRDHKTFMVLNKKRTIYRFSAKRALFILGPFNPVRS
LMIRISVHSVFSMFIICTVIINCMFMANSADRSQDPSISEYIFTGIYILEAVIKILARGF
ILDEFSFLRDPWNWLDFIVIGTAIATCFPDTKVNLSALRTFRVFRALKAISVVSGLKVIV
GALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGILSQKCVKLNCGPNPTSNEDCFVKEN
KSNDFKMCGTWFGRSSCPDGSTCIKTSFNPDYNYTNFDNFGWSFLAMFRVMTQDSWEKLY
RQILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNKNVAAETEAKEKMFQEAQ
QLLREEKEALVAMGIDRSSLNSLQASSFSPKKRKFFGSKTRASFFVRRSKKDGVSVSGPG
DDSAKNPQLLEQTKRLSQNLPVDLFEEHMDPFHRQRALSAVSILTITMQEQEKSQEPCFP
CGENLASKYLVWDCSPAWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHNMSDTF
ITLLKIGNWVFTGIFITEMCLKIIALDPYHYFQHGWNIFDSLVALLSLADVLYNNLWDKG
GRSSRSSRSFLASFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVV
GMQVFGAKFNKTVNSAPQPCRRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEMDGSPL
CIIIFVLIMVVGKLVVLNLFIALLLNSFSNEERDENLGGKTRKTKVQLALDRFRRAFFFL
VHTLQNFCCKKRKGHNSPKSKEFTGSFAGESKDVILLETQPWKEFEAQATLDTGQPRALL
APLAEEEEDIDGWEAGAPPDSQLSAEAQTCDPSLKTKQPTSPDSQGVEIEVFSEEDPNLA
IQIARKQPDTASVLSECSTIDLNDILRNFQRTVPHQKQPDRCLPKGLTCRFLCHKTDKTK
SHWVVWWNLRKTCYQIAKHSWFESFIIFVILLSSGALVFEDVHLARRPQIERLLRCTDNI
FTFIFILEMILKWVAFGFRKYFTSAWCWLDSLIVIVSVVSLMNLPSLKSFRTLRALRPLR
ALSQFEGMKVVVNALVSAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCVNGTDINKY
VNHTEISNRSQCEGSNYLWKVPNVNFDNVGIAYLALLQVATYKGWLDIMNAAVDSTGKDE
QPYFEANLYAYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEEQKKYYN
AMKKLGTKKPQKPIPRPLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESDGQTKEV
KKIFDFLNIAFVAIFTVECLIKIFALRQHYFTNGWNLFDCVVVVLSVISTMVSGLENTGI
PFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFG
MNCFSKVTRSSGIDDIFNFETFSGSMLCLFQITTSAGWDSLLSPMLDSKAPSNSSSSEHC
QQPQIAIIYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEIWEKFD
PEATQFIRYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVTGDRLHCMDVLFAFTTRVL
GNSSGLDTMKAMMEEKFMEANPYKRLYEPIVTTTKRMEEEQCAAVIQRAYRKYVEKMIKL
KQRDGSSSSRQTLCNGDLSSVDVAKVKVHCD
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaggtgctacccagtcattttcccagacgagcggaatttccgcccctttact
tccgactctctggctgctatagagaagcggatcgccatccgaaaggagaagaagaagtcc
aaagacaaggcgtcaactgagccacagcctcggcctcagcttgacctgaaggcctccagg
aagttgcctaagctttatggtgacattccccgagagctggtagcgaagcccctggaagac
ctggacccattctacagagaccacaagacgttcatggtgttgaacaagaagagaacaata
tatcgcttcagtgccaagcgggccttgttcattctggggccttttaatcccgtcaggagc
ttaatgattcggatctctgtgcattcggtctttagcatgttcatcatctgcacggtgatc
atcaactgtatgttcatggctaattctgcggacagaagtcaggaccccagcatttccgaa
tacatcttcactgggatttatattttagaagctgtgattaaaatcttggcaagaggcttt
atcctggatgagttttccttcctccgagatccgtggaactggctggacttcattgtcatt
ggaacagcgatcgcgacttgtttcccagacaccaaggtcaatctttcggctcttcgcacc
ttccgagtgttcagagctctgaaggccatttccgttgtctcaggtctgaaggttatcgtc
ggggccctgctgcgctctgtgaagaagctggtggatgtgatgatcctcactctcttttgc
ctcagcatctttgccctggttggtcagcaactcttcatggggattctgagccagaaatgt
gttaagctcaattgtggcccgaaccctacatccaatgaggactgctttgtgaaggaaaat
aaaagcaatgacttcaagatgtgtggcacctggttcggcaggagttcctgtcccgatggc
tctacatgcattaaaacctcattcaacccagactacaattatacgaactttgacaacttt
ggctggtcttttcttgccatgttccgagttatgactcaggactcctgggagaagctttat
cgacagatcctccggacctctgggatctattttgtcttcttctttgtggtggtcatcttc
ctgggctctttctaccttcttaacttaaccctggccgttgtcaccatggcttatgaagaa
cagaacaagaatgtagctgcagagacagaggccaaggagaagatgtttcaggaagcccag
cagctgttaagggaggagaaggaggctctggttgccatgggaattgacagaagttccctt
aattcccttcaagcatcttccttttcccccaagaagagaaagttttttggttctaagaca
agagcatccttcttcgtgaggagatctaagaaggatggagtgtcggtgtcagggccaggt
gatgactctgctaagaacccacagctccttgagcaaacgaaacgactgtcccaaaacctg
ccggtggacctctttgaggagcacatggatcccttccacaggcagagagcgctgagcgca
gtcagtatcctaaccatcaccatgcaggaacaagagaaatcccaggaaccttgtttccca
tgtggggaaaacttggcgtccaagtacctggtgtgggactgtagtcccgcgtggctgtgc
atcaagaaggtcctgcggacagttatgacggaccccttcaccgagctggccatcaccatc
tgtatcatcatcaataccgtcttcctggccatggaacatcacaacatgagcgacactttc
ataaccctcctgaagataggaaactgggttttcactgggattttcatcacggaaatgtgt
ctgaagatcatcgcgctggacccctaccactacttccagcacggctggaacatcttcgac
agcctggtggccctcctgagcctcgccgacgtgctgtacaacaacctgtgggataagggc
ggccgctccagccgctccagccgctccttcttggcttccttcagggtgctgagggtcttc
aagctggccaagtcctggcccaccctaaacactctcattaagatcatcggccactctgtg
ggcgcactcggaaacctgaccgtggtcctgaccatcgtggtcttcatcttttccgtggtc
ggcatgcaggtctttggcgccaagttcaacaagacggtgaacagcgcgccgcagccgtgc
cggcggcgctggcacatgggggatttctaccactccttcctggtggtcttccgcatcctg
tgtggggagtggatcgagaacatgtgggagtgcatgcaggagatggacggttccccgctc
tgcatcatcatcttcgtgctcatcatggtggtagggaaactggtggtgcttaacctcttc
attgccttgctgctcaactccttcagcaatgaggaaagggatgagaacctaggaggaaag
accaggaaaaccaaagtgcagctagccctggatcggttccgccgggcctttttcttcctg
gttcacactcttcagaatttttgctgcaagaaacgcaaggggcacaactccccaaagtca
aaagagttcacaggcagcttcgctggagagagcaaagatgtgattctcctggagacgcag
ccctggaaggagtttgaggcacaagcgactttggacactgggcagcccagggctctgctg
gcaccacttgcagaggaagaggaggacattgacggttgggaagccggagccccacccgac
tcacagcttagtgctgaggctcagacctgtgacccctctttgaagaccaagcagcccacc
agcccagatagccaaggtgtggaaattgaagtgttttctgaagaagacccgaacttagcc
atacagattgctcggaagcagcccgacactgccagtgtgctctcagagtgcagcacaatc
gacctgaacgatatcctgagaaattttcagagaacagttccccaccaaaagcaaccggat
agatgtttgcccaaaggcctcacctgtcgctttctgtgccacaaaacagacaagacaaag
tcccactgggtggtgtggtggaatctgaggaaaacctgctaccagatcgcaaagcacagc
tggtttgagagctttataatctttgtcatcctgctgagcagcggagcgctggtgtttgaa
gatgtccatctcgcccgccggccccagattgagcgattgctgaggtgtactgataacatt
ttcacatttattttcatcctggagatgattctaaagtgggtggcctttggattccggaag
tatttcaccagtgcctggtgctggcttgattccctcatcgtgatcgtgtctgtggtcagt
ctcatgaacttaccaagcctgaagtccttccggacgctgcgagcactgaggcctctgagg
gctctgtctcagttcgaaggaatgaaggttgtcgtcaacgccctcgtcagtgccattccc
gccattctcaacgtcttgctggtctgcctcattttctggctcatattttgtatcctggga
gtaaattttttttctgggaagtttggaagatgcgttaatgggacagatataaataagtat
gtcaatcatactgaaatttcaaaccgaagccagtgtgaaggcagtaattacttatggaag
gtcccgaatgtcaactttgacaatgtggggatcgcctacctcgctctgctgcaagtggcg
acctataagggctggttggacatcatgaatgccgctgtagattccactgggaaagacgag
cagccgtactttgaggcgaatctctatgcgtatctttacttcgtggtctttatcatcttt
ggctcattcttcaccctgaacctctttatcggcgttatcattgacaacttcaatcagcag
cagaaaaagataagtggccaggacatttttatgacagaagaacagaagaaatactataat
gcaatgaaaaagctgggaaccaaaaaacctcaaaaacccattccaaggccactgaacaaa
tgtcaagcctttgtgttcgacctggtcacaagccaggtctttgacgtcatcattctgggt
cttattgtcctaaatatgattatcatgatggctgaatctgatggccagaccaaagaagtg
aagaaaatctttgatttcctcaacatagcctttgtggccatcttcactgtagagtgtctc
atcaaaatctttgctttgaggcagcactacttcaccaatggctggaacttatttgattgt
gtggtcgtggttctttctgtcattagtaccatggtttctggcctggagaacactggcatt
cctttcccacccacgctcttcagaattgtccgcttggcccggattggccggatcctcagg
ctggttcgggcggcacgaggcatcaggacgctcctcttcgctctgatgatgtccctcccc
tctctcttcaacatcggcctcctgctcttcctggttatgttcatatatgccatcttcggg
atgaactgcttttccaaagtgacgaggagctctgggatcgatgacatcttcaactttgaa
accttctcgggcagcatgctctgtctcttccagataaccacctcggctgggtgggactcg
ctcctcagccccatgctggactccaaagctcccagcaactcctcctcctcggaacactgt
cagcagccgcagatagccatcatctactttgtcagctacatcatcatctccttcctcatc
gtggtcaacatgtacatcgccgtcatcctggagaacttcaacacggccacagaggagagc
gaggaccccctgggcgaggacgactttgagatcttctatgagatctgggagaagttcgac
ccggaggcaacgcagttcatccggtactcggccctgtccgacttcgccgatgccctgccc
gagccgctgcgcgtggccaagcccaacaagttccagtttctagtgatggacctgcccatg
gtgacaggtgaccgtctgcactgcatggatgtgctttttgccttcaccaccagggtcctg
gggaattccagcggcctggacaccatgaaggcaatgatggaggagaagttcatggaagcc
aacccttataagaggctgtatgagcccatagtcaccaccacgaagagaatggaggaggag
cagtgtgctgccgtcatccagagggcctaccgaaagtacgtggagaagatgatcaagctg
aagcagagagacgggtcaagttcgtcacgccagacactttgcaatggagacttgtctagc
gtggatgtggccaaagtcaaggttcactgtgactga
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