Microcaecilia unicolor: 115456954
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Entry
115456954 CDS
T09142
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03020
RNA polymerase
muo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115456954 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
115456954 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115456954 (POLR2A)
03400 DNA repair and recombination proteins [BR:
muo03400
]
115456954 (POLR2A)
Enzymes [BR:
muo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115456954 (POLR2A)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115456954 (POLR2A)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115456954 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
115456954
NCBI-ProteinID:
XP_030042203
UniProt:
A0A6P7WPA0
LinkDB
All DBs
Position
14:18097353..18137046
Genome browser
AA seq
1982 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSN
NPKIKDILTKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQTEGDEDITKEKGHG
GCGRYQPLIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFILGMEPKY
ARPEWLIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADVVKINNQLRRNEQNGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLSIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHINC
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGENVE
FQNLATLKPSNKAFEKKFKFDFTNERALRRTLQEELVKDVLSNAHIQNELESEFDKMKED
REVLRVIFPTGDSKVVLPCNLMRMIWNAQKIFHINPRVPSDLHPIKVVEGVKDLSKKLVI
VNGDDPLSRQAQENATLLFNIHLRSTLCSRRMIEEFRLSNEAFDWLLGEIESKFNQAIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVF
LLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKMQDEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEA
AAHGDSDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTGMF
FGTAPSPMSGMSPAMTPWNQGATPAYGAWSPSIGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPSSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPK
YSPTSPTYSPSSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDD
EN
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcccgccctcgggcgacagcgcatgcccgctgcgcaccatcaagcgggtgcag
tttggcgtcctcagccccgatgagctgaaacggatgtctgttacagaaggtggcataaag
taccccgagactactgaaggtgggcgccccaaacttggaggtctgatggatccccgtcag
ggtgttatcgagagaacaggccgctgccagacatgtgcagggaacatgacagagtgccca
ggtcactttggacacattgagctggccaagccagttttccatgtcggtttcctagtaaaa
actatgaaggtgctccgctgtgtttgcttcttctgttccaagctgctggtagattcgaac
aatcccaagatcaaggacattctgaccaaatcgaaaggacagcccaagaagcggttgacc
catgtgtatgatctctgcaaaggcaagaatatatgtgaaggtggcgaggagatggacaac
aagtttggcgtggagcagacggaaggggatgaggacatcaccaaggagaagggccacggt
ggctgtggtcgctaccagcccctcatcagacgctcgggcctggaactgtacgcagagtgg
aaacacgtgaacgaggactctcaagagaagaagatccttctcagccccgagcgggtgcac
gagatcttcaagcgcatctcagatgaagagtgctttattctgggtatggaacccaagtac
gcccgtcccgaatggctcatagtcactgtgctgccggtccctccgctgtctgtccgaccc
gctgttgtcatgcagggctctgccagaaaccaggatgacctgacgcacaagctggccgac
gtagtgaagattaacaaccagctccgccgtaatgagcagaacggtgcagcggctcatgtc
attgcagaggacgttaaactcttgcagttccacgtggccacgatggtggacaacgagctg
ccaggcctgcccagggccatgcagaaatccggtcgacccttgaagtccctcaaacagcgg
ctgaagggcaaggaagggcgagtgcggggtaacctgatgggcaagcgtgtggatttctca
gcccggacagttattaccccagaccccaatctttccatcgatcaagtaggggtgccgcgc
tccattgctgccaatatgaccttcccagaaattgtcacacccttcaacattgacaggctt
caggaattggtgcgccggggaaacagccagtacccaggagccaagtacatcatccgggac
aatggcgatagaatcgatctacgcttccaccccaagccaagtgatctgcacttacagata
ggctacaaggtggagaggcacatgtgtgatggggacatagttatcttcaaccgtcaaccc
acattgcacaaaatgtctatgatgggacacagggtgcgcattctaccctggtccacattc
aggctgaatctcagtgtgacgacaccatacaatgcagattttgacggggatgagatgaac
ctccatctgccacagtctctggagacacgggcagagatccaggaactggccatggtgccc
aggatgatcgtcacaccccagtccaaccggcctgtcatgggtattgtgcaggacacgttg
acagctgttcgtaaattcaccaagcgggatgtcttcctggagaggggtgaagtgatgaat
ttgctcatgtttttgtccacctgggatggcaaagttcctcagcctgcaatcttgaagcca
cgtccactttggacagggaaacagatcttctccttgatcgtacctgggcatatcaactgc
atccgaacccacagcacccaccctgatgatgaggacagtggtccttacaagcatatatcc
cctggagataccaaggtcattgtggagaatggtgagcttatcatgggtatcctgtgcaag
aagtccctggggacatcagctgggtccttggtccatatctcctatctggaaatgggtcat
gatgtgactcgccttttctactccaatatccagactgtcatcaacaactggttgctgatt
gaaggtcacacaattggaattggagactctattgctgatgccaagacctaccaggacatt
cagaacactattaaaaaagccaaacaagatgtgatagaggtgattgagaaagcacacaac
aatgagcttgagcccacaccagggaacacgctgcgacagacctttgagaatcaggtcaac
cgcattctgaacgatgctcgagacaagactggttcttctgcccagaagtccctgtctgag
tacaataacttcaagtccatggtggtgtcgggagccaaaggctccaagatcaatatctca
caggttatcgctgtggtaggacagcagaacgtagaaggcaaacggatccccttcggcttc
aagcaccgcaccctgcctcatttcatcaaagatgactacggcccagagagcaggggcttt
gtggagaactcctatctggccgggctgacccccacagagttcttctttcacgccatggga
ggcagagagggactgatcgacacagctgtgaaaacagctgagacaggttacattcagagg
cgtctgatcaagtccatggagtctgtgatggtgaagtatgatgccactgtgcggaattcc
atcaaccaagtagtacagctacgttacggggaggatggccttgccggggagaacgttgag
tttcagaacttggcaacactgaagccctccaacaaagcttttgagaaaaagtttaagttt
gattttactaacgaacgagccctgcgccgtacgctgcaggaggagttggtgaaagacgtt
ctcagtaatgcccacatccaaaacgagctggagagcgagtttgacaagatgaaagaggac
cgcgaagttctgcgggtcattttccccacaggggacagcaaggtggttctgccctgcaat
ctgatgagaatgatctggaatgcccagaagatttttcacattaacccccgagtaccttct
gacctacaccctattaaagtagtggagggcgtaaaggacctgagcaagaagctggtgatt
gtgaatggtgatgacccactgagccggcaggcccaggagaatgccacgctgctgttcaac
atccacctgcgctccacgctttgcagccggcgcatgattgaggagttcaggctcagtaac
gaggccttcgactggctactgggtgaaattgagtccaagttcaaccaggctattgcacac
cccggcgagatggtgggtgcgctggccgcccagtctttaggtgagcctgccacccagatg
accctgaacaccttccactacgctggtgtctcagctaagaatgtcaccctaggagtgccc
cgtctgaaagagctgatcaacatctccaagaaacccaagaccccttctctaactgtgttc
ctgctgggacagtctgccagagatgccgaacgagccaaggatatcctgtgccgactggag
catacaaccttacgaaaggttactgccaacactgcgatctactatgatcccaacccccag
aacactgtagtagcagaggaccaggaatgggtaaatgtctattacgaaatgccggacttt
gatgtgacccgcatctcaccctggctgctgcgtgtagagctggatcgcaagcatatgact
gaccgcaagctcaccatggagcagattgctgagaaaatcaatgctgggtttggcgatgat
ttgaactgcattttcaatgatgacaacgcagaaaaacttgtcctgcgcatccgcatcatg
aacagtgatgagaacaagatgcaagatgaggaggaggttgtggataagatggacgatgac
gtgttcctgaggtgcattgaatccaacatgctgacggatatgacgttgcagggtatagag
cagatcagtaaggtatacatgcacttgccacagacagacaacaagaagaaaatcattatc
accgaagatggggagttcaaggccctacaggagtggattctggagacagacggcgtcagt
ctgatgcgggtgttgagtgagaaggacgtggaccccgttcgtaccacctctaatgacatt
gtggagattttcacagtgctgggtattgaggctgtgcggaaagccctggaacgggaactg
taccacgttatctcctttgacggctcctatgtcaactaccgtcacttggcactgctgtgc
gacacgatgaccagccgtggtcacttgatggccattacccgtcatggtgtgaaccggcag
gacacaggacctctcatgaaatgctccttcgaggagacggtggacgtgctgatggaggct
gcagcccatggagattcagaccccatgaaaggtgtgtcggagaacatcatgttgggtcaa
ttggcccctgctggcacaggctgcttcgacttgctgttagatgctgagaaatgcaaatat
ggcatggaaatccccaccaatatccccggcctgggagctgctggcccgaccggcatgttt
tttggcacggcacccagccctatgagtggcatgtccccagcaatgacgccatggaatcaa
ggggccacaccagcctatggggcctggtcccccagcattggtagtggaatgactcctgga
gctgctgggttttctcccagtgctgcctctgacgctagtggattcagccctggttattcc
ccagcctggtcacccacccctggctccccaggctctccaggaccatccagtccttacatc
ccttctcctggtggtgctatgtctccaagttactccccaacttccccagcctatgaaccc
agatctcctggcgggtacacaccccagagccccagctattcccctacctcgccatcctac
agccctacatcgccttcatattctcccaccagccctaactacagtcccaccagtcccagc
tactctcccacttctcccagctactcacctaccagtccttcatacagccccacctccccc
agctactctcctaccagccccagttactcccccacctcccccagctattctcccactagc
ccttcatatagccctacatcacccagctactctcccaccagcccttcctatagccccacc
tcccccagctattctcccaccagcccttcctacagccccacctcccccagctactctccc
accagcccttcctacagccccacctcccccagctactctcctacatctccatcttattct
cccacctcgcccaactatacacccacctcgcccaactacagccccacctcaccaagctac
agccccacatctccctcctactcccccacttcgcccaactatacccctacttcgcccaac
tacagccccacctccccaagctacagccccacttctcccagctatagccctacttccccc
agttactctccttccagtcctcgctacacaccacagtcgcccacttacacccccagctct
cccagctactcgccaagcagcccaagctactcacccagcagccccaaatacaccccaacc
agtccctcttacagccccagctcgccagaatatactcccaccagccccaagtattcccca
acatctcccaaatactcccctacatctcccaagtactcccctacttcccccaagtactcc
ccaacatctcccaagtactcgcccacctccccaacctactctccaacaactccaaaatac
tcgcccaccagccctacctattctcccacctctcccgtttacacacccacctctcccaaa
tactccccgacctcccccacctactctcccagctcgccaaagtactcgccaacatctccc
acctactctcccaccagccccaagggctctacgtactctcccacctcgcctggctacagc
cctacctcccccacctacagcctcaccagcccagccatcagccccgacgacagcgacgac
gagaattag
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