Microcaecilia unicolor: 115475631
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Entry
115475631 CDS
T09142
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
muo03016
]
115475631 (CDKAL1)
Enzymes [BR:
muo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
115475631 (CDKAL1)
Transfer RNA biogenesis [BR:
muo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
115475631 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
115475631
NCBI-ProteinID:
XP_030067377
UniProt:
A0A6P7YIT6
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Position
1:complement(411582398..413318191)
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AA seq
580 aa
AA seq
DB search
MPAICDSVLEDIEDIVSGQDPKPHDRQFSRKSVIPRVRKGSKAKSVQVMEEEEPPSDSII
PGTQKIWVRTWGCSHNNSDGEYMAGQLAAYGYKITEKPEEADLWLLNSCTVKSPAEDHFR
NSIKKAQDEHKKVVLAGCVPQAQPRQDYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLG
QKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIDELVN
RAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGALLRLGMTNPPYILE
HLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFRCVVDFLKERVEGITIAT
DIICGFPGETDEDFQATMSLVEEYQFPSLFINQFYPRPGTPAAKLVQVPAHVKKRRTKEL
SQLFHSYNPYNHKIGERQQVLVTEESFDSRYYVAHNRFYEQVLVPKSPEFMGKMVEVNIY
EAGKHFMKGQPTSDARVYAPSVTKPLAKGEVSGLTEEFRSLVKTGLASKARTSAEIQKSS
LSSKLHLPPLWRGEGEQLKMLSLSLALLAVAIAFLIAVLG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatttgtgattctgtgctggaagacattgaagatattgtctcgggacaagat
ccaaagcctcatgatcgtcagttttcaagaaaaagcgtcattccgagagtgcggaagggg
agcaaagcaaaaagtgttcaagtgatggaggaagaggaacccccaagtgatagcattatc
cctggcacgcagaaaatctgggtccgcacctggggctgttctcacaacaactcggatgga
gaatacatggcggggcagctggcagcgtatggctataagataacagaaaaaccagaagaa
gcagatctatggttgctcaatagttgcacagtgaaaagtccagcagaagaccacttcagg
aattcaattaagaaagctcaagatgaacacaaaaaagtggttttggcaggctgtgtccct
caagcccagccccggcaagactatatgaaaggcctgagcatcataggggttcaacaaata
gatcgtgtagtagaagttgtggaggaaaccattaaaggtcactcggtaagactgctgggt
cagaaaaaggataatggaaagcggttggggggagctcgattggatttaccaaagattagg
aagaacccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgcacttac
tgcaaaactaaacatgctagaggagacctggcgagttatccaattgatgagttggtcaat
cgagcaaagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacact
ggagcctatggcagagacattggcacagatctccccacactgctgtggaagcttgtggaa
gtgattcctgagggagctttgctgagacttggcatgacaaaccctccctatattttagaa
catctggaggagatggcaaaaattctgaatcacccaagagtgtatgctttccttcacata
ccagtgcagtctgcgtctgatagcgtgctcatggacatgaagcgagaatattgtgttgca
gacttcagatgtgtagtggacttcctaaaagaaagagtggaaggtattactatcgctaca
gacatcatttgcggttttccaggggaaacggatgaagattttcaagcgacaatgagcctt
gtggaggaatatcaatttccaagtctttttattaatcagttttacccacgcccagggacc
ccagctgccaaactagtgcaagtcccagcacatgtgaaaaagcggcgaactaaggaactg
tcccagctatttcattcatacaacccatacaaccacaagattggtgagagacagcaggtg
ttagtaacagaagaatccttcgattcccggtattatgttgctcacaatcgtttttatgag
caggttcttgtgccaaagagccctgaatttatgggcaaaatggtagaggtgaatatttat
gaagcagggaagcatttcatgaaaggtcagcccacatcagatgccagagtatatgctcca
tcagtcaccaagccactagcaaaaggtgaagtttctggcttaacagaggagttcagatcc
ttggtgaagactggccttgcttcaaaagcacgcacctcagctgagattcagaagtcctct
ttaagctccaagttgcatctgccaccgctgtggagaggagaaggggagcagctaaagatg
ctttctcttagccttgctcttcttgctgtagcaatcgcatttctcattgctgtgctaggc
taa
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