Musa acuminata (wild Malaysian banana): 103979106
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Entry
103979106 CDS
T03447
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103979106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mus03032
]
103979106
Enzymes [BR:
mus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103979106
DNA replication proteins [BR:
mus03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
103979106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
DUF1744
Motif
Other DBs
NCBI-GeneID:
103979106
NCBI-ProteinID:
XP_009393418
LinkDB
All DBs
Position
3:23391987..23406120
Genome browser
AA seq
1549 aa
AA seq
DB search
MEQSERENMEEPTVSGRRARSRGSDSAVRSAALERLKALRSSGGRRSDAGGLQIKMEAPI
YDTVAEEDYAALVARRREEARGFIVDDDGLGYTDEGQEEDWSNPNLPYFSGDEEDLSGGE
EERPKKRKAPRKDPAPKKPPPSSLSAAAAMMGKQRLSSMFTSSVFKKNDRTKGSSLSSDS
IVDDVIAEFAPDETDREERRRRSLASGILNMSRTAILTPPVAQIKAELPQPVVNDRVVES
GKAKDEEVLAESERGLQEDDYMGHENHVDMEAREEKDLDHSVEPAIDGGFNEVKSDAKME
EPQNEKRLSLNAKIKVENDASVMSATAGWRAVCGEEAHAGPEAGVNESKVNVDVDEKSEF
TLDTDGSLPFYIIDAHEEMFGGNSGTLYLFGKVKAGSAYHSCCVIVKNMQRCVYAIPKDS
VFDSKTIAEFETDTPDSRNSEAALRTTLQEMASGIKSEIAKRLLDLNVSTFSMAPVKRSY
AFERSDIPTGEQYVVKINYPFKDPPLPADLRGEYFLALLGTYSSSLELFLIKRKIKGPSW
LSISKFMSCPAAQRVSWCKFEILVDCPKDICVTSSKTLLEIPPVIVTAINLKTVINEKSA
NEIVTASVICCHKAKIDGPMVPSEWKKWGTLTHFSVVRKLEGGIFPMGLTKEVSDRNLRA
GVNTVSLESSERALLNRLMIELNKLDSDILVGHNISGFDLDVLLHRAQACKVPSSMWSKI
GRLKRSVMPKLTKGGGLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAKTQ
LNRDAKEISPHDIPSMFQSSKTLLELVEYGETNAWLSLELMFHLSVLPLTRQLTNISGNL
WGKTLQGARAQRVEYLLLHAFHAKKYIVPDKIPARAKEHSTMKRKLTNGEEGGDDDVDHV
SPDNDAYHVDQGKGRKGPAYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTV
ERSPEGLVPSLPSLRTTGVLPELLRNLVERRRMVKSWLKTASGLKVQQLDIQQQALKLTA
NSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGL
DDIAKAKAIAGKVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVLFKDGMPYEVIE
RKGLDMVRRDWSLLAKEIGDFCLSQILSGSTCEEVVESIHSCLMKVQEDMRNGEIALEKY
VITKTLTKAPKDYPDAKNQPHVQVALRLKKNGYSGCSAGDTVPYIICCQQDSMSGSSTGI
AQRARHPEEIKKDYSNWMIDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSSKFQ
FKSSESVGQDPSSVLSAIIDDEERYRGCEPLRLSCPSCSSTFDCPPVSSLLSTMHKESQS
DSQAEDLTGANFWKRMRCPRCPDSIDGCEISSAMLANQVKRQAESFICTYYKGLMMCDDE
ICKYTTRSLNLRVIGDSERGTVCPNYPRCNGHLIRQYTEADLYKQLSYFCHVLDATRFLE
KLEQKVTAPIEKELNMIRPVVSPAASVIQKIRDRCSYGWVQLDDLCISV
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagcgagcgagagaacatggaggagcccaccgtctccggtcgccgggctcgt
agccgtggctccgactccgccgtccgttccgccgccctcgagcgcctcaaagcccttcgc
agctccggtggccgacgttctgatgccggtggtctccagatcaagatggaggctcccatc
tatgacacggtcgccgaggaggactacgccgccctcgtcgcgcgccgtcgggaggaggcc
cgcggctttatcgtcgacgacgacggcctcggctacaccgacgagggacaggaggaggat
tggtccaaccccaacctcccctacttctccggtgacgaggaggacctgtcgggcggcgag
gaggagcggcccaagaagcggaaggcgcccaggaaggaccctgcgcctaaaaagcccccg
ccttcctctctctcggcggctgcggcgatgatgggcaagcaacgcctgtcttccatgttc
acatcctcggtcttcaagaagaacgatcggacgaagggatcctccttgtcttctgacagc
attgtggatgatgtaattgccgaatttgcacccgacgagaccgaccgggaggagaggagg
cggcggagcttggcaagcggaatccttaacatgtctcgaactgctatcttgacgccaccg
gtggcccaaattaaggctgagctgccgcagcctgtcgtcaatgatcgtgtagtcgaatct
ggtaaggccaaggatgaggaggtattggcagaatcagagagggggcttcaagaagatgat
tatatgggacatgaaaatcatgtggatatggaagcaagagaagagaaggatttggatcat
agtgttgaacctgcgattgatggtggtttcaatgaggtaaaatctgatgctaagatggag
gagccacagaatgaaaagaggctttctcttaatgcaaaaattaaagtggaaaatgatgct
tctgtgatgagtgcgactgctggctggagggctgtatgtggggaagaggcgcatgctggg
cctgaagcaggggttaatgagtcaaaggtcaatgttgacgttgatgagaagtctgagttt
accctggatactgatggatctcttcctttctacataattgatgcgcatgaggagatgttt
ggtggcaattctggtaccctgtacttgtttggaaaggtcaaagcaggcagtgcatatcat
agttgttgtgtcatcgtgaaaaacatgcaaagatgtgtttatgctatcccaaaagattct
gtttttgacagcaaaaccatagctgagtttgagacggatactcctgattctcgaaactca
gaagcagctctccgaacaactctgcaagagatggcatctggaataaagagtgaaattgca
aaacgattgctggatctgaatgtatcaacttttagcatggcaccggttaagcggagctat
gcctttgagcggtctgatattcctactggtgaacagtatgttgtcaagatcaactaccca
tttaaggatcccccacttccagctgatcttagaggagagtatttccttgcgttgcttgga
acatacagcagttctttggagttgtttctgatcaaaaggaagatcaagggaccatcatgg
ttatcaatttcaaaatttatgagctgcccagctgctcagagggtcagctggtgcaagttt
gaaatactagtcgactgccccaaagatatatgtgtcacttcttcaaagaccttgcttgag
attcctccagtgattgttacggctataaatttgaaaactgttataaatgagaagagtgct
aatgagatagtgacagcttctgtcatctgctgtcataaggcaaagattgacgggcctatg
gttccatctgagtggaaaaaatggggaacacttactcatttttctgttgtccgtaagctt
gaaggaggcatatttccaatgggtcttacaaaggaagtttctgatcgaaatttaagggct
ggggtgaacactgtgtcattggagagcagtgaacgggcattgctgaatcgcttgatgatt
gaactgaacaaattggatagtgatatacttgttggacataatatatcaggatttgacctt
gatgttcttcttcatcgggctcaggcttgcaaggtgccaagtagcatgtggtccaaaatt
ggtcgcctaaagcgctctgtgatgcctaaactcaccaagggaggtggtctttatgggtct
ggagctagtccaggaattatgtcttgcattgcaggtcgtctcctatgtgatacttatttg
tgttcaagagacctcttgaaagaggtaagctactccttgactcaacttgcaaagacacaa
ctaaatagagacgcaaaggagatttctccacatgatattccttctatgttccaatcatca
aagacgcttcttgaactggttgagtatggtgagaccaatgcctggctatctctggaactc
atgtttcatttaagtgttctccccctcactcgacaactaactaatatcagcggcaatctt
tggggaaaaacacttcagggtgctagagcacaaagagtggaatacctgttattgcatgca
tttcatgcaaaaaaatacattgtgccagataaaattcctgcacgtgctaaagaacatagt
acaatgaagagaaaattaactaatggtgaagaggggggtgatgatgatgttgatcatgtc
tctccagacaatgacgcatatcatgttgatcaaggaaaaggtagaaaaggtcctgcctat
gctggtggcttagttttagagcccaaaaagggcctatatgacaagtatatactactactt
gacttcaacagcctttatccttcaataatacaggagtataatatatgcttcactacagtt
gagcgatctcctgaaggtctggttcctagtctgccatctttgagaactactggggtgttg
cctgagttgttgagaaatttggtcgagagaagaagaatggttaaatcatggcttaagact
gcttctggtctgaaagtgcagcagcttgatattcagcagcaagcattgaagcttactgca
aacagcatgtatggttgcttggggttttccaattccagattttatgcaaaaccacttgcc
gaactgataacattgcaagggagggaaatcttgcaaagtactgttgatctagttcagaac
aacttgaacttggaggtaatttatggggatacagattcaatcatgatttacagtgggcta
gatgacattgctaaggcaaaagcaattgcggggaaagtcatccaagaggtcaacaaaaaa
tatcgttgtctggagattgatcttgatggcttgtacaagagaatgcttcttttgaaaaag
aagaaatatgcggctgtgaaagtgctctttaaagatggaatgccatatgaggtaattgaa
cgcaaaggtcttgatatggttcggcgtgattggagtttgctagcaaaagaaataggagat
ttttgcctcagccagatattatctggaagcacctgtgaagaagttgtggagtccattcac
agttgtcttatgaaggtgcaagaggacatgaggaatggtgaaatagcacttgaaaagtat
gtcattacaaagacactgacaaaagcaccaaaagactatccagatgccaaaaaccaacct
catgtgcaggttgctctaagattgaagaaaaatggctactcaggctgctctgctggtgat
acggttccttatatcatttgctgccagcaggatagcatgtctggttcttctactggaata
gctcaaagagctagacatcctgaggagataaaaaaagactacagcaattggatgattgac
attgactactacttgtcacaacagattcatcctgtagtatcacgtctgtgtgcttcgatt
cagggcactagtccagcacgtttagctgagtgtttagggcttgattcatctaagttccaa
tttaaatcatctgaatctgttggccaagatccttccagtgtgctttcagccataatagat
gatgaagaaaggtatcgtggctgtgagcctctgaggttgtcatgtcccagctgctccagt
acctttgactgccctcctgtttcgagtttgctttcgaccatgcacaaagaaagccaatct
gattcacaagcagaagacctaacaggtgctaacttctggaaaagaatgcgttgtccaagg
tgcccagatagtattgatggatgcgagatttcttcagctatgttagctaaccaggtgaaa
aggcaagctgagagtttcatctgtacgtactacaaaggattgatgatgtgcgatgatgaa
atatgcaaatacaccactcggagtctgaatcttcgggtaatcggtgattccgaaagagga
acagtctgcccaaactatccacgctgcaatggtcacctcataagacagtacacggaggcg
gatctatacaagcagctttcttacttttgtcatgtattagacgccacacggtttcttgaa
aagttggaacaaaaagttacggcgcctattgagaaagagctcaacatgatccggccagtg
gtcagcccggcagcttctgtgattcaaaagatccgtgaccggtgttcttacggatgggtg
cagctcgatgacctttgtatctccgtttaa
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