Musa acuminata (wild Malaysian banana): 103981635
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Entry
103981635 CDS
T03447
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103981635
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
103981635
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103981635
03036 Chromosome and associated proteins [BR:
mus03036
]
103981635
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103981635
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103981635
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103981635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
PDS5
Htt_N-HEAT_1
Vac14_Fab1_bd
Adaptin_N
Cnd1
CLASP_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
103981635
NCBI-ProteinID:
XP_018681031
LinkDB
All DBs
Position
4:complement(6733696..6744405)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDVQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYAHVLLPPLEILCSVEETCVRDKAVESLCRIGAQMRES
SLVDWFAPLVKRLAAGEWFTSRVSSCGLFHIAYPSAPDQLKAELRSMYSQFCQDDTPMVR
RAAALNLGKFAATIEPNQLKTDILSLFEDLTRDDQDSVRLLAVEGCAALGKLLESHDCVA
HILPVIVNFSQDKSWRVRYMVANQFYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCHISSPQLAVQHILPCVKDLSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLEDKVFSIRDAAANNLKLLAEEFGPEWAMQHIIPQV
LEKINNPHYLYRMTILQAISLIAPVMGADITCQKLLPVVIAFSKDRVPNIKFNVAKVLQL
LIPIVDQSVVEKTIRPCLVELGEDPDVDVRYFAGQALQACDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgattgatgagccactatacccaatagctgtgctgatagatgagttaaagaat
gaagatgttcagctgcggctaaactccatccggaaactttccactattgcacgagcactt
ggcgaggagagaaccagaaaagaattaattccatttcttagtgaaaacaatgatgatgat
gatgaagttcttcttgcaatggcagaagagttgggcgtgtttattccatatgttggtggt
gtcgaatatgctcatgttttgcttccacctttggagattttgtgtagtgtagaggaaacc
tgtgttagggacaaggctgttgagtcactgtgtcgtattggagcacaaatgagagaaagc
agcttggtagactggtttgctcctttggtaaagagactagcagctggtgagtggtttact
tccagggtctcctcatgcggtctctttcatattgcttatccaagtgcaccagatcagttg
aaggctgaactaaggtccatgtacagccagttctgccaagatgacacgcctatggtgaga
cgagctgctgcattaaatttaggaaaatttgctgctacaatagaaccaaaccaattgaag
acagacatcttgtcactgtttgaggatctaacaagagatgatcaagattctgtacgcctg
ttggctgttgagggttgtgcagcacttggaaaattgctggaatcccatgactgtgtcgca
catattcttccagtcattgtcaatttctctcaggataaatcatggcgtgtccgctatatg
gttgcaaatcaattttatgagctttgtgaggctgttggccctgaagctaccaggactgat
ttggtaccagcatatgttcgtcttcttcgtgataatgaggctgaagtgcgcatagcagct
gctgggaaggtgacaaagttttgccatatttcaagcccacaacttgcagttcagcatatt
cttccttgtgtaaaggacttgtcatcagattcttcacagcatgttcgctcagctttagct
tcggtgatcatggggatggcacctatcttaggaaaggatgcaactatagaacaacttctt
ccaatttttctttccctcctgaaagatgagtttccagatgttcgactcaatataattagc
aaacttgatcaagtaaatcaggttattggaattgatttgctgtcccagtcactcttacct
gccatcgtagagcttgcagaggatagacattggcgagttcgacttgccataattgaatat
atccctttactggcaagtcaactaggtgttggcttttttgatgataaacttggttccctt
tgcatgcaatggttggaagataaggtcttctccatcagggatgcagctgcgaataacttg
aaacttcttgcagaagagttcggtccagaatgggcaatgcagcacataattccacaggtg
ctagagaagatcaataatccacattacttgtatcgtatgaccattctacaagcaatatct
ctgatagcccctgtcatgggtgctgatatcacatgtcaaaagcttttgcctgtagtgatt
gccttctcgaaggacagggtacccaacatcaaattcaatgttgcaaaggttttacagttg
cttatacccatagttgaccaatctgtggtggagaaaacaattcggccgtgtctggttgag
ctcggtgaggatccagatgtggatgtaagatattttgcaggccaagcactacaagcttgt
gatcaagttatgatgtccagctag
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