Musa acuminata (wild Malaysian banana): 103997930
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Entry
103997930 CDS
T03447
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103997930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103997930
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103997930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
103997930
NCBI-ProteinID:
XP_018673883
LinkDB
All DBs
Position
9:complement(9423434..9459706)
Genome browser
AA seq
2050 aa
AA seq
DB search
MSLFLSDEELRLLSDDAAAVAERADGAIRDLRCQLDTVRAEADAAAIAAEQNCALLEQRY
ETLSSDLARVRSENTQLSASLEQRLSEIADAQAEKHQLHLKAIGKDGEIERLSLEVAELN
KSKRHLLELLEQKDAETREKNATIQSYLDKIINLTDNAVDKEARLQNQEAELARCRATCV
RVNQEKELLEKHNAWLNEELSAKVNSLVEERKTHMEIVADMSAKLADFERQINETSSSLK
RNNERIQELEMRNASLEKELCSSKDAAAANEEQLSSELSTVTKLAELYKERSEEWSKKAG
ELEGVIKALETHLSQVENEYKNKLENESSLRKNLEKDASDLKGKLEKYEAELESARKANE
LSIIPMSRFHADTNLEELSVAETTSCRTYENNQMLVPKFPIGISGTALAASLIRDGWSLA
KIYEKYQEAADAARHEKWGRKNAEAVLERVLHEIEEKAEIILDERAEHERMIEAYNLMNQ
KLQQSLLEHDSSENIIRNLKAELKKRERDYTIAQKEISDLEKQVTVLLKECQDIQVRCGV
SQVYADNSLASSLDIDGINAGGSITECPMSFKDINELVEQNVQLRSHVLRLSSEIENKEE
ELKENFQIQLQKVTEEATAKVDTVLKKSEEQGQMIESLHSSVAMYRRLYEEERRTLASSH
VYKESIPEDGKKELMLLFEGSQEVSRKAYEQLAEHARSLEEDLGKLRSEVSSLRLERDKR
ALEANFAKDHFDGLKKEIEHQRQESNAVSARNVELTHLVVDFQKRLRECSNSLQEAEENA
RKLTMEVSILKHEKEILNNSERRASDEVRNLSERVHRLQSSLDTIQSAGEVRENSRAVEM
RKLEEYAKRIEREWAEVKRELQEERDRVRALTNEKENALEASINQFQEMKKELAEAWSAV
ASAESRAAVAEARCSEFETKMKSTEHKVIKGDSRHDHTVFSTNEVSGELWKITEELEKIK
EEAKANKDYMVQYKEIAHTNDVALKQIESAHETYKLEAERVKKALEGEVSSLRDRVSELE
KQYVLKCEEAVSLTEAKDREVSSLLAETSGLRGEISQKVTQIESLGTQLSLLKEDLEREH
KRWRTAQDNYERQVMLQSETIQELTKTSKELSLLQCEIAKLQEVSDTIKTENEMLKTSWE
KEKVTLQAMKDEAERKSNELNEQNKILLGQLESLHVRLADKEHNSAGLFAQSTDSKAESD
LHSVISHLRRSKEIAETEKTLLKQENSRLQAQLETALKASEAAQKLLHSKCENDRAMLFK
DEEFKALQLQVREINLLRESNMQLREENKHNFDECQKYRDEAQKAKVDAEKYENLLMEKQ
LEFDACQKEVEMLRIEINHLNNRINELAESHKNIDPEEYDRMKNELQQTKVLLRESEAEV
GLANNLVTEKQGNILNLEQALAKCKLELNEKEKKLNDAVQVEGTIKQENEKQKKLLSILK
KKSDTLAKEKEDLNQEKEVLLKEIEDFKSGRKTSGDTSTDQATKEKDTRIQILEKTLERE
RDDNKKEKQKRQSTEKTMLELIQKVNKDKKSFLEEFSRHKHAVEMLKATGVTAPQLPSES
TLDEQFATYLQTTTQLEAASGSIADDGLGSHSVAVDTSATDTSMPVAGSGRQVSAQQIRQ
LTSQVKSAEEKERGSTVVKVATGARKVGRRLVRPRLERPEEPQVDVGTSGMDGPTQMEEE
KAGSSHEPEPAGDNSLTQSTSSSRKRLASSTAEQKEDIVAQDEVGADTAPPPKKPKESDV
MQDVIQDSNDEQIILPATENIETAEASFPSSNVSDVQTPEDMEADQAPVLPNEETADAVE
DDDTFVKEEPVEEQKASFDDTNREEEVQGEGDAIVEELSDKPTETIELLDESLRSEGGKE
ILQLAAADEDEKEEGELIADEAEEQEEGGKSGDCQRESTPSDGAGIVDETGYAVEASSPE
VPSEKNASADAMDEVREGHNNEDQFVHESSQSPQRSLGVREGSLSTTGHATISQQQSSST
ISETEESRAGRTITISERAKQNARLRQAGIAAPATSRGRGRTTGGFRGNRGAGRGGRARG
GRGQPFGERE
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctttctatcggacgaggagctccggctcctctccgatgacgcagccgctgtg
gcggagcgcgccgacggtgcgatccgcgacctacgctgccagctcgacaccgtccgggcg
gaggccgacgccgccgccatcgccgccgagcagaactgcgccctcctcgagcagcgctat
gagacactctcgtccgacttggcgcgtgtgcgctccgagaacacccagctctccgcgtcc
cttgagcagaggctctccgagattgctgatgcccaggccgagaagcaccagctccatctc
aaagccattggaaaggatggagaaatcgagaggttgtcattggaagtagcagaactcaac
aagtctaaacggcatttgctggaattgctggaacagaaggatgcagagaccagggagaaa
aatgccacgatacagagctatctggacaagatcattaatctgacagataatgctgttgac
aaggaggccaggctgcagaatcaagaagcagaattggcacgatgtcgtgctacatgtgtt
cgtgttaatcaggagaaagagcttctagaaaagcacaatgcatggcttaatgaagaattg
agtgcaaaggttaacagtcttgttgaagagcgtaaaacacatatggaaatcgtggctgat
atgtctgctaaacttgctgactttgagagacagatcaatgaaacttctagttcattgaaa
cgaaataatgaaagaatacaggagttggaaatgagaaatgcctcgttggaaaaagagttg
tgctcgtcaaaggatgccgctgcagctaacgaagagcaactttcttctgaactgtcaact
gttacaaaactggctgaactatacaaagagagatctgaagaatggtccaaaaaggctgga
gagcttgagggtgttattaaagcattggagacacatctttcccaggttgaaaatgagtac
aaaaataaacttgaaaatgaatcttccctgagaaaaaatcttgagaaggatgcttccgac
ttgaaaggaaaactagagaaatatgaagctgaacttgagagtgctagaaaggctaatgaa
ttgagcatcatcccgatgtccagatttcatgcagatacaaatttagaggagctatcagtt
gcagaaacaaccagctgtagaacatatgagaacaatcagatgcttgtccccaagtttcca
attggtatttcaggcaccgcattagcggcttccctaataagggatggctggagtcttgct
aaaatatatgaaaaatatcaagaagctgctgatgctgcacggcatgagaaatggggccga
aaaaatgcagaagctgttttggagcgggttctacatgaaatcgaggagaaggctgaaata
attttggatgaacgagctgaacatgagagaatgattgaagcctacaatttgatgaaccaa
aagttgcagcagtctttgctggagcatgatagttctgagaatatcattcgaaacttgaag
gccgaattgaaaaagcgtgagcgtgattatacaatcgcgcagaaggaaatcagtgatctt
gagaaacaggtgacagtactattaaaagaatgccaagatattcaagttcgctgtggtgtt
tctcaagtatatgctgacaattctcttgcaagttctcttgacattgatggaattaatgcc
gggggttctattactgaatgccctatgtctttcaaggacataaatgaactagttgagcaa
aatgtccaactccgaagtcatgtgcttaggctttctagtgaaattgagaataaggaagag
gagttaaaggagaatttccaaattcagctccaaaaggtcactgaggaggcaactgctaag
gttgatacagtgctaaaaaaatctgaagaacaagggcagatgattgaatctcttcatagc
tctgttgcaatgtataggagattgtatgaggaagagaggaggacgttagcttctagccat
gtgtacaaagaatctattccagaggatggaaagaaggagcttatgcttctatttgagggt
tctcaggaagtttcaaggaaagcctatgagcagcttgctgagcatgctagaagtctagaa
gaggacttgggtaaattaaggagtgaagtttcctcattacgtttagagcgtgataaaagg
gctttggaagcaaattttgccaaagatcattttgatggtttgaagaaggaaattgaacac
cagagacaggaatccaatgctgtctcagctagaaatgtggaattgactcatttagtagtt
gatttccaaaagaggctccgggaatgttctaattccctacaagaagctgaggagaatgca
aggaagctaactatggaggtgtccattttgaagcatgaaaaagagatactaaataactca
gaaagaagagcttctgatgaagttcgcaacttatcggagagagtacatcgtcttcagtca
agccttgacaccattcaaagtgctggagaggttcgggagaattcaagagctgtagaaatg
agaaaactagaggaatatgcaaaacgaatagagagagagtgggcagaagtcaagagagaa
cttcaagaagaaagggatcgtgttcgtgctctaacaaatgaaaaggaaaatgcattggag
gcttctataaaccagtttcaggaaatgaagaaagagttagctgaggcctggagtgctgtt
gcatctgccgagtctagggctgctgtagctgaggctcgatgttctgagtttgaaacaaag
atgaagagtactgaacataaggtcattaaaggggatagcagacatgaccatacagtgttt
tctacaaatgaggtttctggagagctctggaaaataacagaggagttggaaaaaataaaa
gaagaggcaaaagctaataaggattatatggttcagtacaaagaaatagcacacacaaat
gacgtggcactgaagcaaattgaatcagcacatgaaacgtacaaattggaggctgagaga
gtaaagaaggccttagaaggtgaagtttcatctctcagggatagggtgtctgagctcgag
aagcaatatgtattaaagtgtgaagaagctgtctctcttactgaagccaaagatagggaa
gtctcttctctcttggctgaaacttcaggactaaggggagaaatttctcaaaaagtaaca
cagatagaatcactgggcacacaattgtcactgttaaaagaagatctagaaagggagcac
aaacgctggcgaactgcccaagacaattatgaaagacaggttatgctccaatcagagaca
attcaggagttgactaaaacatctaaagagttatctttgttgcaatgtgaaatagcaaag
ctgcaggaggtttcagataccatcaaaactgaaaatgaaatgctgaagacatcatgggaa
aaggaaaaggtaactttgcaggctatgaaggatgaagctgagaggaaatctaatgaatta
aatgaacaaaataaaatattacttggtcagctggagtctctgcacgttagattagccgat
aaagagcacaattctgctggacttttcgctcagagtacagattcaaaagcagagagtgat
ttacatagtgttatcagccatcttcgccgttctaaagaaatagcagagactgagaaaacc
ttgctgaagcaggaaaactcacggctacaagcacaacttgaaactgctctcaaggcttct
gaggcagctcaaaagttgctccactctaaatgtgagaatgatagagcgatgttattcaag
gatgaagagttcaaggctctgcagcttcaggtaagagaaatcaatttgcttcgtgaaagc
aatatgcagcttcgtgaggagaacaagcacaactttgatgaatgtcagaaatatcgtgat
gaagcacaaaaagctaaagtagatgcagaaaagtatgaaaaccttctaatggagaagcaa
ttggaatttgatgcatgccaaaaagaggttgagatgctgaggatagagataaaccaccta
aataatagaatcaatgagttagctgaatctcataaaaatatcgaccctgaggagtacgat
aggatgaaaaatgaactccaacaaactaaggtgttgctaagagaatctgaggcggaggtt
ggactggcaaataatcttgtaacagagaagcaaggaaatatattgaatttagaacaagcc
cttgcgaagtgtaaacttgaattaaatgaaaaggagaagaagttaaatgatgctgttcaa
gttgaaggaactatcaaacaggaaaatgaaaaacaaaagaaacttctctccattctgaag
aagaaaagtgatactttagcaaaggagaaggaggacttgaaccaggaaaaagaagttctg
ctgaaagagatagaagattttaaatcaggaaggaagacctcaggtgacacttcaactgac
caagccacaaaggaaaaggacaccagaatccagattttagagaaaactctagaaagagag
agggacgacaacaaaaaagagaaacaaaaacggcagagtactgagaagacaatgttagaa
cttattcagaaagttaataaggataagaaatcatttttggaggagttctcgaggcacaaa
catgctgttgagatgttgaaggcaactggagtaacagctcctcagcttccttctgagagt
acattggatgaacaatttgctacatatcttcaaacaactactcagctagaagcagcttca
ggttccattgcagatgatgggctgggaagtcattctgttgctgtagatacctcagccacc
gatacatctatgcctgttgcaggttccgggcgacaagtttctgctcagcagatacggcaa
ctgacatctcaagtgaaatctgccgaggaaaaagagagagggtctactgtggtcaaagta
gctactggggctcgcaaggtagggaggaggcttgtccgccctcgtctagagcgacctgaa
gagcctcaagttgatgttggaacctctgggatggatggcccgacacagatggaagaggaa
aaggctggctcatcccatgaaccagaacctgcaggtgacaattctttgacacagtcgaca
tcttctagtcgcaaacgtttggcctcatcaacagcagagcaaaaagaagacattgttgca
caagatgaagttggtgctgatactgctcctccgccaaagaagcccaaagagtcagatgtg
atgcaagatgtgatccaagacagcaatgatgaacaaatcatcttgccagcaactgaaaat
attgaaacagcagaggcttcttttccatcgtcgaatgtctctgatgtacaaacacctgaa
gacatggaagctgatcaggctcctgtattgccaaatgaagagactgctgatgcagtagag
gatgatgataccttcgtcaaggaagaaccagtggaagagcaaaaggcttcctttgatgat
acaaatcgtgaagaagaggttcagggtgaaggtgatgcaatagttgaagagctatccgat
aagccgacagaaacaattgagttgctggatgaaagtttgaggagtgagggtggcaaagaa
attctgcaactagctgctgctgatgaagacgagaaggaagaaggagagttgattgcagat
gaagctgaggaacaggaagagggtggcaaatcaggagattgccagcgtgagtcaactcca
agcgatggagccggtattgttgatgaaactgggtatgctgttgaagcctcctcacctgaa
gttcctagcgagaaaaatgctagtgccgatgctatggatgaggttcgtgaaggtcataac
aacgaagatcagtttgttcatgaaagttcacaaagccctcagagatccttgggcgtacgc
gagggctcactaagcaccaccgggcatgcaacaatttcgcagcagcagagttccagtact
atttcagagacggaagaatcaagagcaggaagaacaataacaatatcagagagagccaag
cagaatgcccgtctaagacaagctggaattgcagccccagcgacatccagaggccgaggc
cggaccacaggtggcttcaggggtaatcgtggggcaggccgaggaggaagagcacgaggt
gggcgtgggcagccttttggtgaaagagagtga
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integrated database retrieval system