Musa acuminata (wild Malaysian banana): 103998232
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Entry
103998232 CDS
T03447
Name
(RefSeq) cyclin-dependent kinase D-1-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03022
Basal transcription factors
mus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103998232
09124 Replication and repair
03420 Nucleotide excision repair
103998232
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mus01001
]
103998232
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103998232
03019 Messenger RNA biogenesis [BR:
mus03019
]
103998232
03400 DNA repair and recombination proteins [BR:
mus03400
]
103998232
Enzymes [BR:
mus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
103998232
2.7.11.23 [RNA-polymerase]-subunit kinase
103998232
Protein kinases [BR:
mus01001
]
Serine/threonine kinases: CMGC group
CDK family
103998232
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103998232
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
103998232
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103998232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
RIO1
Haspin_kinase
DUF3984
Motif
Other DBs
NCBI-GeneID:
103998232
NCBI-ProteinID:
XP_009417925
UniProt:
A0A804KK90
LinkDB
All DBs
Position
9:12189925..12195755
Genome browser
AA seq
432 aa
AA seq
DB search
MIPGTDSGGGSAGEEDPSLAKRVADRYLKREVLGEGTYGVVFKAIDTKTGQTVAIKKIRL
GQYKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMESDLEAVIRDRNIV
LSLADTKSYLQMTLKGLAYCHKKWVVHRDMKPNNLLIASDGQLKLADFGLARIFGSPDRK
FTHQVFARWYRAPELLYGAKQYGAGVDVWAAGCIFAELLLRRPFLQGSSDIDQLGKIFAA
FGTPKPSQWPDMVYLPDYVEYQYVPAPPLRTLFPMASDDALDLLSKMFIYDPKARITVQQ
ALEHRYFSSVPAPTKPSLLPRPPPKGESQNQKPSDFNPQEGPIVLSPQRKLRRVTLDHDG
LAGSTFRSEKAGENAKEVRHMDGTTSQSGSMPMSIDLGAMFGSIPPPRPTLNSVDRSHLK
RKLDLDAEFDHL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgggtacggactccggtggcggttccgccggcgaagaggatccctctctagcg
aagcgcgtcgctgaccgctacctgaagcgcgaggtgctcggcgagggcacctacggggtc
gtcttcaaggccatcgacaccaagacggggcaaacagttgcaataaagaagattcgactt
ggacagtacaaagaaggtgtaaacttcactgcacttagggaaattaaattgcttaaagag
cttaaggatccaaatattattgagttgattgatgctttccctcacaagggtaatttgcat
cttgtgtttgaattcatggagagtgacttggaagctgtcattcgtgatagaaatattgtc
ctgtctctagctgacacaaaatcatatctccaaatgaccctaaaaggacttgcatactgc
cataaaaaatgggttgtacacagggatatgaaacccaacaacctactcattgcttctgat
ggacagcttaagcttgcggactttggtctggcacgcatctttggaagtccagatcgcaaa
tttactcaccaggtttttgcccgttggtatagagcacctgagctattgtatggggccaag
caatatggggcaggggtggatgtgtgggctgcaggttgtatattcgccgaacttctcctt
agacgaccctttctgcagggctcaagtgacatcgatcaactgggaaagatttttgcggct
ttcgggactccaaagccttctcagtggcctgatatggtgtaccttcctgattatgttgaa
taccaatatgttcctgcacctccattgcggacactttttccaatggctagtgatgatgcc
ttggatttattatcaaagatgttcatttatgatccgaaggcaagaataacggttcaacag
gctttagaacacaggtacttctcatcagtacctgcaccaacaaagccatccttgcttcca
aggccacctccaaagggagaatcacagaatcagaagccttcagacttcaatccacaggaa
gggcctatcgttttgtctccgcaaaggaagctaaggagggtcaccctcgaccacgatgga
ttggcgggaagcacattccgatccgaaaaggctggtgagaatgcgaaggaagtcagacat
atggatgggactactagtcaaagtggtagtatgccgatgtcgatagacttgggagccatg
tttggctccataccacctcctagaccaactttgaacagtgttgataggtcgcatctgaag
agaaaacttgatctggatgctgaatttgatcacctgtag
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