Microcoleus vaginatus: D0A34_03020
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Entry
D0A34_03020 CDS
T08026
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mvag
Microcoleus vaginatus
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mvag03009
]
D0A34_03020 (rimO)
Enzymes [BR:
mvag01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D0A34_03020 (rimO)
Ribosome biogenesis [BR:
mvag03009
]
Prokaryotic type
ribosomal protein modification factors
D0A34_03020 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
UNU17968
LinkDB
All DBs
Position
730956..732266
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AA seq
436 aa
AA seq
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MATKPTIAFTHLGCEKNRIDTEHMIGLLAQAGYQVDSNEELADYVVVNTCSFIQAAREES
VRTLVELAEANKKVVITGCMAQHFQQELLDELPEAVAIVGTGDYHKIVNVMQQVEKGDRV
SLVSSEPTYIADETTPRYRTTSEGVAYLRIAEGCDYRCAFCIIPHLRGNQRSRTIESIVA
EAKQLASEGVKEIILISQITTNYGKDIYGEPKLAELLRALGEVDVPWIRMHYAYPTGLTP
QVVEAIRETPNVLPYLDLPLQHSHPEILRAMNRPFQAGINDAIVDRLKAALPGAVMRTTF
IVGFPGETDEHAAHLLEFVKRHEFDHVGVFVFSPEEGTPAFSLPQQIPAEIMEMRRNSVM
AAQQPISLKKNQESVGQVVDVLIEQEQPETGELIGRSARFSPEVDGLVYVTGEARLGSIV
SVKITGADVYDLYGQV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaagccaacgatcgcatttactcacctcggctgcgaaaaaaatcgcatcgat
accgaacacatgattggcttgctggctcaagcgggctatcaagtggattctaatgaagaa
ttagctgattatgttgtagtcaatacttgtagttttatccaagctgcgcgagaagagtca
gtccgcaccttggtagaattggcagaagctaataaaaaagtagtcatcaccggctgcatg
gcacagcattttcagcaggaattgctggatgaattgccagaagcagtcgcaattgtcggc
acaggcgactatcacaaaatagtcaatgttatgcagcaggtggaaaagggcgatcgagtt
tccctcgtctcctcagaacctacttacatcgctgacgaaactactccccgctaccgcacc
acatcggaaggtgtcgcttatctgcgaatagcagaaggctgcgactatcgctgtgcattt
tgcattatcccgcacttgcgcggaaatcaacgatcgcggacgatcgaatctatcgtcgcc
gaagctaagcaattagcctccgaaggggtaaaggaaattatcttaatttctcaaattacc
accaactacggcaaagatatttatggcgaaccgaaactagccgaactgcttcgggctttg
ggtgaagtagatgtaccttggattcggatgcactacgcctatcctacaggtttgactccg
caagttgtcgaggcaatccgcgaaacgcccaacgttttgccgtatttggatttacccctg
caacactcgcacccggaaattctgcgggcgatgaatcgaccttttcaagccgggatcaat
gatgctatagtcgatcggctcaaagcagcacttccgggcgctgtgatgcgaacaactttt
attgttggcttccccggcgaaaccgacgaacacgcagcacacttgctggaatttgtcaag
cgccatgaatttgatcacgtaggagtttttgtattttcgccagaagaaggaaccccagcc
ttcagcttgcctcagcaaatacctgcagaaataatggaaatgcggcgaaattcggtaatg
gcggcacaacaacctatatcattgaagaagaatcaagagtctgtcggtcaggtagttgat
gtcctgatagaacaagaacaaccagagacaggcgagttgattggtagatccgctcggttt
tccccagaagtagatggactcgtctatgtcacaggagaagcgcggctgggttcaatcgta
tctgtgaaaattactggtgcagatgtctacgacctctacggtcaagtgtaa
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