Massilia varians: MasN3_12930
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Entry
MasN3_12930 CDS
T08769
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase large subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
mvar
Massilia varians
Pathway
mvar00230
Purine metabolism
mvar01100
Metabolic pathways
mvar01120
Microbial metabolism in diverse environments
mvar01232
Nucleotide metabolism
Module
mvar_M00958
Adenine ribonucleotide degradation, AMP => Urate
mvar_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
MasN3_12930 (xdhB)
Enzymes [BR:
mvar01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
MasN3_12930 (xdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF6055
Motif
Other DBs
NCBI-ProteinID:
BDT57799
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Position
1415121..1417451
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AA seq
776 aa
AA seq
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MNDAGTPIIDAAQWTEVGRARPHESAVLHVLGQATYTDDIRETAGTLHAALGLSGRAHAR
ILAIDLEPVRASRGVVAVLTAQDIPGLNDCGPIIHDDPILADGLVQYVGQPVFIVVADSH
DNARRAARLARIDYEDLPAILTPQEARAARSYVLPPMRLARGDAQTAFAAAPHRVKGELY
VGGQEQFYLEGQIAYAIPGEDRGMHVYCSTQHPSEMQHVVAHALGLHSHHVTVECRRMGG
GFGGKESQSALWASSAAIAAARTRRPVKLRADRDDDMLVTGKRHCFHYEYEVGYDGEGRI
LAAKVDMVTRAGFSADLSGPVATRAVCHFDNAYYLSDVEIRAACGKTNTQSNTAFRGFGG
PQGAIAIEYVIDEIARNLGRDPLDIRRLNFYGKSERNVTPYGQAIVDNVIHELVAELEQT
SEYHARRAHIDEFNRASPVLKKGLALTPVKFGIAFNVTHLNQAGALVHVYVDGSILVNHG
GTEMGQGINTKVMQVVAHELGVDLGRVRATATNTSKVANTSATAASTGADLNGKAAQDAA
RKIRDRLAAFVAAEFGGDPAEVRFADDTVFVAGQALRFGEVVAKAYLARVQLWSDGFYAT
PGLHWDPKTMNGHPFSYYAYGAAVSEVVVDTLTGEWKLLRADALYDAGNSLNPAIDIGQV
EGAFIQGMGWLTTEELWWNPAGKLMTHAPSTYKIPGVSDCPEDFRVRLFRNRNVEDSIHR
SKAVGEPPLLLPFSVFFAIRDAVSSVGGHRVHPPLNAPATCEEILKAVAAVEAASA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgcaggcacccccatcatcgacgcggcgcaatggaccgaagtcgggcgcgcg
cgcccgcacgaatcggccgtgctgcacgtgctcggccaggccacctataccgacgacatc
cgcgagaccgccggcaccctgcatgcggcgctcggcctgtccggccgcgcccatgcgcgc
atcctcgccatcgacctggagccggtacgcgccagccgcggcgtggtggcggtgctcacc
gcgcaggacatcccgggcctgaacgactgcggccccatcatccatgacgacccgatcctg
gccgacggcctggtccagtacgtgggacagccggtgttcatcgtcgtcgccgacagccac
gacaatgcgcgccgcgccgccaggctggcgcggatcgactacgaagacctgccggcgatc
ctcacgccgcaggaggcgcgcgcggcccgctcgtatgtactgccgccgatgcgcctggcg
cgcggcgatgcgcaaaccgccttcgcggcggcgccgcaccgcgtcaagggcgagctctac
gtcggcggccaggaacagttctacctcgagggccagatcgcctacgcgattccgggcgaa
gaccggggcatgcacgtctactgctcgacccagcacccgagcgagatgcagcacgtggtg
gcgcacgcgctcggcctgcactcgcaccacgtgacggtcgagtgccgccgcatgggcggg
ggcttcggcggcaaggaatcgcagtcggcgctgtgggcgtcgagcgcggccattgccgcc
gcgcgcacgcgccgtccggtcaagctgcgcgccgaccgcgacgacgacatgctcgtcacc
ggcaagcgccactgcttccactacgagtatgaagtcggctacgacggcgaagggcgcatc
ctggccgcgaaagtcgacatggtcacgcgcgccggcttctcggccgatctgtccggcccg
gtggcgacgcgcgccgtctgccacttcgacaacgcctattacctgtccgacgtcgagatc
cgcgccgcctgcggcaagaccaacacccagtcgaacaccgccttccgcggcttcggcggg
ccgcagggcgcgatcgccatcgagtacgtgatcgacgagatcgcgcgcaatctcggccgc
gatccgctcgacatccgccgcctgaacttttacggcaagagcgagcgcaacgtcacgccc
tacggccaggccatcgtcgacaacgtcatccacgagctggtggccgagctggagcagacc
agcgaataccacgcgcgccgcgcgcacatcgatgagttcaaccgcgccagcccggtgctc
aagaaggggctcgcgctcaccccggtgaaattcggcatcgccttcaacgtcacccacctg
aaccaggccggcgcgctggtgcacgtctacgtggacggttcgatcctggtgaaccacggc
ggcaccgagatggggcagggcatcaacaccaaggtgatgcaggtggtggcgcatgaactg
ggcgtggacctgggacgcgtgcgcgccaccgccaccaataccagcaaggtcgccaacacc
tcggccaccgccgcctcgaccggcgcggacctgaacggcaaggccgcgcaggacgccgcg
cgcaagatccgcgaccggctggccgcttttgtcgctgcggagttcggcggcgaccccgcg
gaggtgcgctttgccgacgataccgtgttcgtggccggccaggccctgcgcttcggcgag
gtggtggccaaggcctacctggcgcgggtgcagctgtggtccgacggcttctatgccacc
cccggactgcactgggacccgaagaccatgaacggccacccgttctcctattacgcctac
ggcgccgccgtgtcggaagtggtggtggacacgctcaccggcgaatggaagctgctgcgc
gccgacgccttgtatgacgccggtaactcgctcaacccggcgatcgacatcggccaggtc
gaaggcgccttcatccagggcatgggctggctcaccaccgaggaattgtggtggaacccg
gcgggcaagttgatgacgcatgcgccctcgacctacaagatccccggcgtttccgactgc
ccggaagacttccgcgtgcgcctgttcaggaaccgcaacgtcgaggacagcatccaccgc
tccaaggccgtgggcgagccgccgctgctgctgccgttctcggtgttcttcgcgatccgc
gacgccgtatcgagcgtcggcggacaccgggtacatccgccgctgaacgcgccggccacc
tgcgaggaaatcctgaaggcggtggcggccgtcgaagcggcgagcgcttga
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