Massilia varians: MasN3_14450
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Entry
MasN3_14450 CDS
T08769
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mvar
Massilia varians
Pathway
mvar00540
Lipopolysaccharide biosynthesis
mvar01100
Metabolic pathways
mvar01250
Biosynthesis of nucleotide sugars
Module
mvar_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MasN3_14450 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mvar01005
]
MasN3_14450 (hldD)
Enzymes [BR:
mvar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MasN3_14450 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
mvar01005
]
Core region
MasN3_14450 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BDT57951
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Position
1599665..1600666
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AA seq
333 aa
AA seq
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MILVTGAAGFIGANLVHALSQRKPFSVFAVDNMARPEKFLNIVDAEVADYADKEDFLVRL
KAGEFNGKFSAVLHQGACSNTMESDGRYMMKNNYEYTIALFEFCQRERIPFIYASSAAVY
GSGSVFREERQHERPLNVYGYSKFLFDQYMRRYWQQHGMSKGSQVVGLRYFNVYGPLEGH
KGTMASVPFHQFHQFRNEGKVKLFGANDGYEAGTQKRDFIYVEDVVKVNLFFLDHPDKRG
IFNLGTGRAQPFNDLAVATVNALANEGNAPLTLAQIVDQGLLEYIPFPDKLKGKYQSFTQ
ADIGALRAAGYHEPFTDVATGVAKYMEYLKSGR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatactggttactggcgcagcaggcttcatcggagccaacctggtccacgcactctcg
cagcgcaagcccttcagcgtgttcgcggtcgataacatggcgcgtccggaaaaattcctg
aacatcgtcgacgccgaagtggccgactatgccgacaaggaagacttcctggtgcgcctg
aaggccggcgaattcaacggcaagttctccgccgtgctgcaccagggcgcctgctccaac
accatggagagcgatggccgctacatgatgaagaataactacgagtacaccatcgcgctg
ttcgagttctgccagcgcgaacgtattcccttcatctacgcctcgtcggccgcggtgtac
ggcagcggcagcgtgttccgggaagagcgccagcacgagcgtccattgaacgtctacggc
tattcgaaattcctgttcgaccagtacatgcgccgctactggcagcagcacggcatgagc
aagggcagccaggtggtcggcctgcgctacttcaacgtgtacggcccgctggaagggcac
aagggcacgatggcctcggtcccgttccaccaattccaccagttccggaacgagggcaag
gtcaagctgttcggcgccaacgatggctatgaggccggcacccagaagcgcgacttcatc
tacgtggaagacgtggtgaaggtgaacctgttcttcctggatcaccccgacaagcgcggc
attttcaacctcggcaccggccgcgcccagcccttcaacgacctggcggtggccacggtc
aatgcgctcgccaacgagggtaatgcgccgctcacgctggcgcagatcgtggaccagggc
ctgctcgagtacattcccttccccgacaaactgaaaggcaagtatcagagcttcacccag
gccgatatcggcgcgctgcgcgccgccggctaccatgagcccttcaccgatgtggccacg
ggcgtcgccaagtacatggaatacctgaaatcgggccgctga
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