KEGG   Massilia varians: MasN3_18480
Entry
MasN3_18480       CDS       T08769                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
mvar  Massilia varians
Pathway
mvar00740  Riboflavin metabolism
mvar01100  Metabolic pathways
mvar01110  Biosynthesis of secondary metabolites
mvar01240  Biosynthesis of cofactors
mvar02024  Quorum sensing
Module
mvar_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:mvar00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MasN3_18480 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MasN3_18480 (ribD)
Enzymes [BR:mvar01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MasN3_18480 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MasN3_18480 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BDT58354
LinkDB
Position
2053774..2054919
AA seq 381 aa
MANDTAQIHNDTEGMALALAWAAKGMHITAPNPRVGCVLVRDGVVIGAGHTQPAGQAHAE
IEAMRDARQRGHDLAGATAYVTLEPCSHYGRTPPCSNALVQAGIGRVVAAMLDPNPLVAG
RGLAQLEAAGIAVTSGILAEQAHELNIGFFSRMRRGLPWVRLKVAASLDGATALAGGESQ
WITGPDARADGHAWRARAQAILTGIGTVKADDPQLTVRGIETPLPPRRVIVDSRLEIDPG
ARILQGEPCWIVAAAESERAAALRALGHELIILPNAQGKVDLPALMRELGRREINEVHVE
AGSKLNASMVREGCVDELLVYLAPSLIGPGQGMFALPALARLADQRRLRFHDVARVGDDI
RILARFAQPVIHTEFTEHTEE
NT seq 1146 nt   +upstreamnt  +downstreamnt
ttggcaaacgacacggcacagattcacaacgataccgagggcatggcgctggccctggcc
tgggcggcgaaaggcatgcacatcacggcgccgaatccccgggtcggctgcgtgctcgtg
cgcgacggcgtcgtgatcggcgccggccacacccagccggcgggccaggcgcatgccgag
atcgaggcgatgcgcgacgcgcgccagcgcggccacgacctggccggcgccaccgcctac
gtcacgctggagccctgcagccattacgggcgcactccgccgtgctcgaacgcgctggtg
caggccggcattgggcgcgtggtggcggccatgctcgaccccaatccgctggtcgccggc
cgcggcctggcccagctggaggcggccggcatcgccgtcacctcgggtattctggccgaa
caggcccatgagctgaacatcggtttcttctcgcgcatgcggcgcggcctgccctgggtg
cgcctgaaggtcgccgccagcctggacggcgccaccgcgctggccggcggcgaaagccag
tggatcaccgggccggatgcgcgcgccgacggccatgcctggcgcgcccgcgcgcaggcg
atcctgaccggcatcggtacggtcaaggccgacgatccgcagctgaccgtgcgcggcatc
gagacccccttgccgccgcgccgcgtgatcgtcgacagccggctcgagatcgatcccggg
gcgcgcatcctgcagggcgaaccctgctggatcgtcgccgccgccgaatcggagcgggcc
gcggccttgcgcgccctgggtcacgagctcatcattctgccgaacgcgcagggcaaggtc
gacctgccggccctgatgcgcgagctgggccgccgcgagatcaacgaagtgcacgtggaa
gccggttcgaagctgaacgcgtcgatggtgcgcgaaggctgcgtcgacgaactgctggtc
tacctggctcccagcctgatcgggccggggcagggcatgttcgcgctgccggcgctggcg
cgcctggccgaccagcgccggctgcgttttcacgacgtggcgcgggtcggcgacgacatc
cgcatcctggcccgcttcgcgcaacccgtcattcacactgaattcaccgaacacactgag
gaataa

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