Methanosarcina vacuolata: MSVAZ_1409
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Entry
MSVAZ_1409 CDS
T03815
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
mvc
Methanosarcina vacuolata
Pathway
mvc00730
Thiamine metabolism
mvc01100
Metabolic pathways
mvc01240
Biosynthesis of cofactors
mvc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
mvc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSVAZ_1409
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
MSVAZ_1409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvc03016
]
MSVAZ_1409
Enzymes [BR:
mvc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
MSVAZ_1409
Transfer RNA biogenesis [BR:
mvc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MSVAZ_1409
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AKB43678
UniProt:
A0A0E3Q539
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Position
complement(1775098..1776390)
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AA seq
430 aa
AA seq
DB search
MVKEKIESRIRTHQENKHTPDNDTRKLDFLDSEFSCSEYGIKTEVVIVRYGELALKSTGV
RNWYEKILMRNIAAMLDSRNIPYSQIRREWGRIFIESADPCAAEAAADVFGIVSTSPALT
AEPTLESAASVCAALARDLVLEGESFAIRARRSGNHTFSSADIGKNCGDAVWNELEKEGK
HPRVNLSSPDKEIFVEMRQNLAYVYLKTFKGVGGLPLGTQGSMVVLMSGGLDSPVAAWLM
MKRGVMITPVYCSNSPYAEDAARERAFDCIRQLQKWAPGHQFTTYEIPHGPNLKAFIDIC
NRKNTCLLCKRMMYREAYEVMIKEGASGIITGSSLGQVASQTAANMYAEIYQLAIPIYHP
LIALDKTEIMDIARKIGTYDISNRSAGSCTAVPERPEIGAKYDLIVLEERKMDIETMVSN
AMKGAQVLKL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaaaaaattgaatctcgcattcgtactcatcaggaaaataaacacactcca
gataatgatacaagaaaactggattttttggattcagaattctcttgttccgagtatgga
attaagacagaagtagttatagtccggtatggtgaacttgctcttaaaagtactggagtc
cgaaattggtacgagaaaatccttatgaggaacattgccgcaatgcttgactcaagaaac
attccctattctcagatccggcgggaatggggcaggatctttatcgagagtgcggatcca
tgtgcagccgaagccgcagctgatgtttttgggatagtctcaacgtctcctgcattgaca
gcagagcctactcttgagagtgcagccagtgtatgtgctgccctcgccagggatcttgtt
ttagaaggagagtcttttgctatcagagcccgaagaagtggaaaccatactttttcttcg
gcagacatagggaaaaactgtggggatgctgtttggaatgaactggaaaaagaaggaaaa
catcccagagttaacctgagttctcctgataaggaaatttttgttgaaatgaggcagaac
ctggcttacgtctatctaaaaacatttaaaggagtagggggtcttcctctcggcacgcag
ggtagtatggtagttttaatgtccggcgggcttgactctcctgttgcagcatggcttatg
atgaagcgtggcgtaatgattacacctgtttattgcagtaactctccttatgcagaagac
gcggcaagagagcgtgcttttgactgcatccggcagctccaaaaatgggctccaggacat
cagtttacgacttatgaaattcctcacggtcccaatctcaaggcttttatagacatttgc
aaccgaaaaaatacctgtcttctctgcaaacgcatgatgtacagggaagcctatgaggtt
atgataaaagaaggtgcaagcggaattatcaccggttcttccctgggacaggtagcttcc
cagactgctgcaaatatgtatgctgaaatctatcagcttgctatcccgatttatcaccct
ttgattgcattagacaaaactgaaatcatggatattgcccgcaagattgggacctacgat
atctccaatagatcagcaggtagctgtactgctgtccccgagcgtcctgaaataggggca
aaatacgaccttatcgtacttgaggaaagaaaaatggatatcgagactatggtttccaat
gctatgaaaggagcacaagtccttaaactctga
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