Microterricola viridarii: AWU67_11040
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Entry
AWU67_11040 CDS
T04252
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mvd
Microterricola viridarii
Pathway
mvd00190
Oxidative phosphorylation
mvd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mvd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AWU67_11040
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWU67_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvd03019
]
AWU67_11040
Enzymes [BR:
mvd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AWU67_11040
Messenger RNA biogenesis [BR:
mvd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AWU67_11040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
AMB59310
UniProt:
A0A109QX39
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All DBs
Position
2403771..2405942
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AA seq
723 aa
AA seq
DB search
MDVDNLLDSGLGRDFDDDFEPFDTAGDADLPEERFLDRELSWLAFNQRVLELAEDPATPL
LERTNFLAIFASNLDEFFMVRVAGLKRRILTGLALPSNIGRAPHDVLDDISRRAHELQER
HAAVYQNMVSPALADAGIDIARWESLDEAEQERLHDYFSRQIFPVLMPLAVDPAHPFPYI
SGLSLNLSVRVRNTRTGKQEFARLKVPQMLPRFLEISSTEPGRQRFITLEDLIANHLGDL
FPGMEIVAHHVFRVTRNEDVVVDEDETENLIQALEKELLRRRFGPPIRLEVTDDMDEVTL
GLLVRELDVSEQEVYRLPSPLDLGGLFDLGRIDRPDLRFPKHVPTTSVQLQPNEPNAKPD
VFASISRADILVHHPYESFATSVQAFIEQAAADPDVLAIKQTLYRTSGDSPIVEALIDAA
ESGKQVLALVEIMARFDEQANISWARKLEKAGVHVVYGLVGLKTHCKLALVIRQERGELR
HYSHIGTGNYNPKTSRIYEDLGLFTADDQVGKDLTRLFNELSGYAIEKKFKRLLVAPLHL
RKGLLKRIDDETANALAGRPAGIRIKVNSMVDEAIIDALYRASNAGVPVDIWVRGICSLK
PGVEGMSENIRVRSILGRYLEHSRIFSFRNDDDPQVYIGSADMMHRNLDRRVEALVRLVA
PEHLAQIDGLFERAFNPRTSAWSLGADGEWTRHHLDDAGHPLDDMQNRLMQQIAQRKRPG
GRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgacaacctgctggactccggcctcggccgcgacttcgacgacgactttgag
cccttcgacacggccggcgacgccgacctgcccgaggagcgcttcctcgaccgggagctg
agctggctcgccttcaaccagcgcgtgctcgaactcgccgaagacccggcgacgccgctg
ttggagcgcaccaacttcctggccatcttcgccagcaacctcgacgagttcttcatggtg
cgggtcgccggcctgaagcgccgcatcctgaccggcctcgccctgccgagcaacatcggc
cgtgccccgcacgacgtgctcgacgacatctcgcggcgcgcccacgagctgcaggagcgc
cacgccgccgtctaccagaacatggtcagcccggcgctggcggatgccggcatcgacatc
gcccgctgggagtcgctggacgaggcagagcaggagcgcctgcacgactacttctcgcgg
cagatcttccccgttctgatgccgctcgccgtcgacccggcccaccccttcccctacatc
tctgggctctcactcaacctctctgtgcgggtgcgcaacacccgcacgggcaagcaggag
ttcgctcgcctcaaggtgccccagatgctgccgcgcttcctcgagatcagctcgacggag
cccggccgccagcgcttcatcacgctcgaggacctgatcgccaaccacctgggcgatctg
ttccccggcatggagatcgtcgcccaccacgtcttccgggtcacccgcaacgaagacgtc
gtcgtcgacgaggacgagaccgagaacctgatccaggcgctcgagaaggagctgctgcgg
cgccgcttcggcccgccgatccggctcgaggtcaccgacgacatggacgaggtgacgctc
ggcctgctcgtgcgcgaactcgatgtcagcgagcaggaggtgtaccggctgccgtcgccg
ctggacctcggcggactgttcgacctcggccggatcgaccgccccgacctgcgcttcccc
aagcacgtgccgacgacgagcgtgcagctgcagccgaacgagcccaacgcgaagccggat
gtcttcgcctccatctcacgcgccgacatcctcgtgcaccacccctacgagtccttcgcc
accagcgtgcaggccttcatcgagcaggccgccgccgaccccgacgtgctcgccatcaag
cagacgctctaccgcacctctggcgacagcccgatcgtggaggcgctcatcgacgccgcc
gaatccggcaagcaggtgctcgccctcgtcgagatcatggcccgcttcgacgagcaggcc
aacatcagttgggcgcgcaagcttgagaaggctggcgtgcacgtcgtctacggcctggtc
gggctgaagacgcactgcaagctggcgctcgtgatccgccaagaacgcggcgagctgcgt
cactacagccacatcggcaccggaaactacaacccgaagacgagccgcatctacgaggac
ctcggcctgttcaccgccgacgaccaggtcggcaaagacctgacccgtctgttcaacgag
ctgagcggctacgcgatcgagaagaagttcaagcgcctgctcgtcgcgccactgcacctg
cgcaaggggctgctgaagcggatcgatgatgagacggcgaacgcgctggccgggcgccct
gccggcatccggatcaaggtcaactcgatggtcgacgaggccatcatcgacgccctctac
cgggccagcaacgccggcgtgcccgtcgacatctgggtgcgcggcatctgcagcctgaag
cccggcgtcgagggcatgagcgagaacatccgggtgcgctcgatcctcggccgctacctg
gagcactcccgcatcttcagcttccgcaacgacgacgacccgcaggtctacatcggcagc
gccgacatgatgcaccgcaacctcgaccgccgcgtcgaggcgctggtgcgcctggtcgcg
ccggagcacctggcacagatcgacgggctgttcgagcgcgcgttcaacccgcggacgagt
gcatggtcgctcggggctgacggcgaatggaccagacaccacctggacgatgcggggcat
ccgctcgacgacatgcagaataggttgatgcaacaaatcgcccagaggaagcgcccaggg
ggccgccggtga
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