Mannheimia varigena USDA-ARS-USMARC-1312: X874_19860
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Entry
X874_19860 CDS
T03028
Name
(GenBank) Pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
mvg
Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg00240
Pyrimidine metabolism
mvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mvg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
X874_19860
Enzymes [BR:
mvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
X874_19860
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AHG78619
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All DBs
Position
complement(2127122..2128030)
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AA seq
302 aa
AA seq
DB search
MNKYLVLSQEVKDGIAKGLPIVALESTIISHGMPYPQNVKMAREVEQIIRENGAVPATIA
IVDGKIKIGLSDDELEMFGSSKGIAKVSRRDLAEIVASKRLGATTVATTMIAAELAGIKF
FVTGGLGGVHRGWEHNLDISADLDEFAQTNVTVVCAGAKSILDLPATLEYLETKGVPVIG
YKTKNLPAFFCRDSGLPLPISSDDLQHIADTIKTKWELGLKGGVVVANPIPEEYALDPKY
IDNIIANAVQEAEEKGVVGKNITPFLLGKIVEMTGGKSLEANIHLVKNNAKVGAQLAVSY
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatttagttttatcacaagaagttaaggatggtattgcaaagggattgcca
attgttgcattagaatcaacaattatttctcacggtatgccttatcctcaaaatgtaaaa
atggctcgagaagttgagcaaattatacgagaaaatggtgctgtacctgcaacaattgca
attgttgatggaaaaatcaaaattggtttatctgacgatgaactagaaatgtttggtagc
agcaagggtattgcgaaagtttcacgccgagatttagctgaaattgttgcatcaaaacgt
ttaggagcaacaacagttgcgacaacaatgattgcagcagaacttgcaggaattaaattc
ttcgttactggtggattaggtggtgttcatcgaggttgggaacataatttagatatatca
gcagatttagatgaatttgctcaaaccaatgtaacggtagtttgtgcaggggctaagtca
attttagatcttccagctacattagaatacttagaaacaaaaggtgttcctgttattggt
tacaaaacaaaaaatttacctgctttcttctgccgtgatagtgggttacctctacctatt
tcttctgatgacttgcaacatattgcagatacaattaaaactaaatgggagttaggttta
aaaggaggagtggttgtcgctaatccaattcccgaagagtatgctttagatcctaaatat
attgataatattattgcaaatgctgttcaggaagcagaagaaaaaggagtagtaggaaaa
aatattaccccattcttattaggtaaaattgtagaaatgacaggaggtaaaagtcttgag
gcaaatatccatttagttaaaaataacgcgaaagttggagcacaacttgcggtcagttat
tttagttaa
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