Mannheimia varigena USDA-ARS-USMARC-1296: X808_21190
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Entry
X808_21190 CDS
T03027
Name
(GenBank) Pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
mvi
Mannheimia varigena USDA-ARS-USMARC-1296
Pathway
mvi00240
Pyrimidine metabolism
mvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mvi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
X808_21190
Enzymes [BR:
mvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
X808_21190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AHG76637
UniProt:
W0QEC7
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All DBs
Position
complement(2240483..2241391)
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AA seq
302 aa
AA seq
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MNKYLALSQEVKDGIAKGVPIVALESTIISHGMPYPQNVKMAREVEQIIRENGAVPATIA
IVDGKIKIGLSDDELEMFGSSKGIAKVSRRDLAEIVASKRLGATTVATTMIAAELAGIKF
FVTGGLGGVHRGWEHNLDISADLDEFAQTNVAVVCAGAKSILDLPATLEYLETKGVPVIG
YKTKNLPAFFCRDSGLPLPISSDDLQHIADTIKTKWELGLKGGVVVANPIPEEYALDPKY
IDNIIANAVQEAEEKGVVGKNITPFLLGKIVEMTGGKSLEANIHLVKNNAKVGAQLAVSY
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatttagcgttatcacaagaagttaaggatggtattgcaaagggggtgcca
attgttgcattagaatcaacaattatttcccacggtatgccttatcctcaaaatgtaaaa
atggctcgagaagttgagcaaattatacgagaaaatggtgctgtacctgcaacaattgca
attgttgatggaaaaatcaaaattggtttatctgatgatgaactagaaatgtttggtagc
agcaagggtattgcgaaagtttcacgccgagatttagctgaaattgttgcatcaaaacgt
ttaggagcaacaacagttgcgacaacaatgattgcagcagaacttgcaggaattaaattc
ttcgttactggtggattaggtggtgttcatcgaggttgggaacataatttagatatatca
gcagatttagatgaatttgctcaaaccaatgtagcggtagtttgtgcaggagctaagtca
attttagatcttccagctacattagaatacttagaaacaaaaggtgttcctgttattggt
tacaaaacaaaaaatttacctgctttcttctgccgtgatagtgggttacctctacctatt
tcttctgatgacttgcaacatattgcagatacaattaaaactaaatgggagttaggttta
aaaggaggagtggttgtcgctaatccaattcccgaagagtatgctttagatcctaaatat
attgataatattattgcaaatgctgttcaggaagcagaagaaaaaggagtagtaggaaaa
aatattaccccattcttattaggtaaaattgtagaaatgacaggaggtaaaagtcttgag
gcaaatatccatttggttaaaaataacgcgaaagttggagcacaacttgcggttagttat
tttagttaa
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