Mannheimia sp. USDA-ARS-USMARC-1261: X781_13330
Help
Entry
X781_13330 CDS
T03026
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mvr
Mannheimia sp. USDA-ARS-USMARC-1261
Pathway
mvr03030
DNA replication
mvr03410
Base excision repair
mvr03420
Nucleotide excision repair
mvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X781_13330
03410 Base excision repair
X781_13330
03420 Nucleotide excision repair
X781_13330
03440 Homologous recombination
X781_13330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mvr03032
]
X781_13330
03400 DNA repair and recombination proteins [BR:
mvr03400
]
X781_13330
Enzymes [BR:
mvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X781_13330
DNA replication proteins [BR:
mvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
X781_13330
DNA repair and recombination proteins [BR:
mvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
X781_13330
NER (nucleotide excision repair)
GGR (global genome repair) factors
X781_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHG73481
UniProt:
W0Q4M3
LinkDB
All DBs
Position
complement(1345215..1348070)
Genome browser
AA seq
951 aa
AA seq
DB search
MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRNGEPTGAMYGVLNMLKSLISQVNPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRAQIQPLHAIIKALGIPLISIEGVEADDVIGT
LAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDFL
ALMGDSADNIPGVKGVGEKTALALLQGIGSLKQIYENLDQIATLSFRGAKNFAPKLEAEK
ANADLSYLLATIKTDVELDVTHDQLLTQAQNRAELATLFEHYEFKRWLNEVNNNANPVTQ
TSAEKVPNNYQATQAVKNEENFADPIIIDRSKYETVDTEAKLVAWIEKLTSANIIAVDTE
TDSLDSMSANLVGISFALENGEACYIPLGHKQKALPKQADMFGDDEAETEIADELVKNQL
NLTACLTQLKPILENRAIKKIGQNIKYDLTIFANYGIELQGVEFDTMIESYTLNSTGRHN
MDDLAYRYLGHKTIPFEELAGKGKNQLTFDKIEIAKAAEYAAEDADVTMKLHQVLWQKLS
QEPKLVKLFNEIEMPLVSVLSRIERNGVLIDPKKLLTQSAEIEKRLSEVEQLVHTEAGQV
FNLASTKQLQEILFDKLGLPVLKKTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKL
KSTYTDKLPQLINAKTGRVHTSYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAR
EGYKIVAADYSQIELRIMAHLANDEGMIKAFAEGKDIHRATAAEIFGVALDEVTSEQRRS
AKAINFGLIYGMSSFGLSNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAAEKGYVE
TLFGRRLYLPDIKSSNAILRKAAERVAINAPMQGTAADIIKVAMIGIDKAIQGDDEIKMI
MQVHDELVFEVKADKIEHYSQLIKAEMEKAISLKVPLIAEVGIGDNWDEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgcaaaaaatccactggtgctagtggacggttcttcttacttatatcga
gcatttcacgcatttcctccgctaacgaatcgcaatggcgagccgacaggggcgatgtat
ggtgttttgaatatgttaaaaagcttgatttcacaagtaaacccaagccacattgcggta
gtgtttgatgcgaagggcaaaaccttccgtgatgagctattcgagcaatataaatctcac
cgcccaccaatgccggatgagttacgagctcaaattcaaccactacacgctatcatcaaa
gccttaggtattccgctgatctccattgaaggggtagaagcggacgatgtgatcggcacc
cttgccgtgcaagctgccaaagatggcaaagacgtgttaatcagtacaggcgataaagat
atggcacaactggtgaacgatcacattatgttgataaatacgatgaacaacactttgctt
gaccgtgaaggcgtcatcgaaaaatacggcattccgcccgagttgattatcgatttctta
gccctaatgggcgattccgccgataatattccgggtgtaaaaggcgtgggtgaaaaaacg
gcgttagccttattacaagggattggttcgcttaaacagatttatgaaaatttagatcag
attgcgacactttcgtttcgtggggcaaaaaactttgccccgaaattagaggcagaaaaa
gccaatgcggatttatcctacctgctcgccaccatcaaaactgatgtggaattagacgtt
acccacgatcaacttttaacccaagcacaaaatcgtgcagagcttgctacattatttgag
cattatgaatttaagcgttggttaaatgaagtaaataacaatgcgaaccctgttacacaa
acctcagctgaaaaagtgccgaataattaccaagcaacgcaagcggttaaaaatgaggaa
aattttgcagatcctatcattattgaccgtagcaaatatgaaacggtggatacggaagcc
aaattagtggcttggattgaaaagctcacatcagccaatatcattgcggtggataccgaa
acggatagtttagattctatgtcagccaatttggtgggaatttcctttgctcttgaaaat
ggcgaggcttgctatattccgcttgggcataagcaaaaagccctgccaaaacaagcggat
atgtttggcgatgacgaggcagaaaccgaaatcgcagacgaattggtaaaaaatcagcta
aatttgaccgcttgtttaacccaactcaaaccgattttagagaatcgtgccattaaaaaa
atcgggcagaacattaaatatgatttaactatttttgctaactacggcattgagttacaa
ggcgttgagtttgatacgatgatcgaatcctacacgctaaacagcacaggtcgtcataat
atggacgacttagcttaccgctatttggggcataaaaccattccgtttgaagagttagca
ggtaaaggcaaaaatcagcttacttttgataaaattgagatcgccaaagcagcggaatat
gctgccgaagatgccgatgtaacgatgaaactgcaccaagtgctatggcagaaattatca
caagagcctaaattggtaaaactctttaacgaaatcgaaatgccattggttagcgtgctt
tctcgcattgaacgcaatggcgtattgattgaccctaagaaattattaacgcaatcggca
gaaattgaaaaacgcttaagtgaagttgagcagttagttcacaccgaagcagggcaggtg
tttaaccttgcttcaaccaagcagttacaagaaattctgtttgataaattaggcttaccg
gtgctgaagaaaaccccgaaaggagctccttcgactaacgaggaggtgctagatgaattg
gctcaacaaggccatcttgtgccgaaattattaatggagcatcgtggcttaagtaagttg
aaatctacttacacagacaaattacctcagttgattaatgcaaaaacagggcgagtgcac
acctcttacaatcaagcagtaacggcgacagggcggctttcgtcaagtgatccgaattta
caaaacattccgatccgaaacgaagaaggcagacgtattcgccaagcctttgtggcaaga
gaaggctataaaattgtagcagccgactattcccaaattgagctacgcattatggctcac
ttggcgaatgacgaaggaatgattaaagcctttgctgaaggtaaagatattcaccgagca
acggcagcagaaatttttggtgtggcattagatgaggtaacgagcgagcaacgtcgcagt
gcgaaggctatcaacttcgggctgatttatggaatgtcgtcattcgggctttcaaaccaa
ttggggattgggcgagctgaagcccaaaaatatatggatctctacttccaacgttacccg
gcagtacagcagtttatgacggatattcgtgaagttgccgcagaaaaaggctatgtagaa
actttattcggtcgtcgtttatatttacctgatattaaatcaagcaatgctattttgcgt
aaagcggcagaacgagtggcaattaatgcaccaatgcaaggcacggcggcggatattatc
aaagttgcgatgattggcattgataaagctattcaaggcgatgatgaaatcaaaatgatt
atgcaagtacacgatgaattggtgtttgaagtgaaagccgataaaatcgagcattatagc
cagctaatcaaagcagaaatggaaaaagctatttcgcttaaagtgccattaattgctgaa
gttggcattggcgataattgggacgaggctcattaa
DBGET
integrated database retrieval system
