Mizuhopecten yessoensis (Yesso scallop): 110452628
Help
Entry
110452628 CDS
T05079
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110452628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
BNR_6
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
110452628
NCBI-ProteinID:
XP_021356933
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MEHNIFGLLLLISVLNGIHCQRSRQPQCEQGSCYPATGDLLIGRKSEEQLYASSTCGSKR
PQTYCIVSHLEEEKKCFSCDSRTPWSRQNNQSHMLENVVSSFIGDNSFSGDRKLRWWQAE
NGKENVYIQLDLEAEFHFTHLIMTFKSFRPKAMLVERSHDFGKTWKVYRYFAYNCKKSFP
NISRDPVQNLTDVICETRYSDVEPSTGGEVIFRVLPPFIPVRDPYSVNVQNLLKLTNLRI
NITELHTLGDTLLDNRREIKEKYYYALYDMTVRGSCSCYGHAANCVPVPGYNNDPGMVHG
QCECTHNTMGRNCELCRVGYKDVPWQPARHNQPFECQKCKCNNHADDCKFDPAVYEQSGK
ISGGVCIDCRHNTMGKNCQECQTFYYQDPNKDIRAPDICQPCDCDPDGAQYRGNCDSHTD
PAYGLEAGRCTCKQYVTGKRCDACKDGHYNLTTNNPYGCDTCICNTLGTIGNYGCDKDSG
QCFCKRYVTGVKCDTCYPGFWNLSGEVTGCSPCDCDLGGAESEVCDSQDGQCICRPNIGG
RQCNRPATGYYFSLLDYFRYEAEDARGIGRTRLYTLPSYNYSILPWRQQWTGQGFMRVSE
GDSIEFTVNNIDFPMDYDIVIRYNPAMQDIWEDVRVYVVRPGPVNEFGPCANHMPSDDEK
VTSLMTNRSYTVVSPPACLEPGKEYTIRLEFLRFRTNAETPDAALNIDSIVLVPSLNTVP
IFYGSGYPSFLKEEFQRYGCYNSQLKAFQEEPRDLCYNLTFSISSVLHNGALECNCDSTG
SVDLECNVAGGQCRCKTNVVGRRCDRCAPGTYDFGPDGCKPCNCVGEGSQDNFCDKQSGQ
CLCRRNVGGRICDRCVDGYYGYPNCRPCQCNGNADTCTNEIGACLQCRDYTVGNNCESCA
PGYHGDPRISYRIPCEPCLCPGGPDSPIQHADSCSVDPYSRNLQCNCRPGYQAPRCDRCA
ENYFGHPSQLNGTCEACICNNNIDPDVPGGCNTTTGQCLLCLFNTEGFSCERCKPEYYGD
ATTQSCKDCVCDIYGTDRNGGPCDRETGQCPCLPNVEGMSCDRCAVGFWNITSGEGCSSC
GCDSLGSLGPECNQFDGQCQCKPGRGGLDCSECPANHWGDPTRECYPCDCDGQGSSQTQC
DRRTGQCVCLTGITGYKCDRCARGTTGELPNCKPCGDCFDNWDRIIRDLSAQTSGLLDDA
TRIKTTGAERAFDKEFRQMEDNMEEIRQIVNNASVASTDMKDLEDLLKQLRQNLTESMNQ
LDSTEQGLDNRMDNIRQGNNNIRALQTRVNDLKLKADQLVKNASAIRAKDVEGAFNITKE
AQQRSQMAQAKIDNTQNIMDESERVRLETERMLEQGQDRFDNQLAENRNNLANLDTSVSG
LSNRISDINEMVCDGRGDPCDDICGGGGCDKCGGVGCDDGAVTKAEDAIKLAKDAESLLA
MKENDANVLLSSIQTVQQGAEEAKNSATMAYNAALRAKNETEVSRLMLETLLNEVADFLS
PSSGTPEAIRDIADEVLAMSISLSPQQITALADEINKTIQGLQDIDVILNATSDDLNLAQ
KLKNQAEMAEADAKSILGKAEDVLDNLQSATSAQEAADRAINQADSDISDAERDLTQIES
ETAAAAEKSNRSLQALEELRIRLITLGNKYIGNDRKVFRAEEAARAASTLATTAEMKADE
LANEYTDTADKLNTKYNLTSVAQQRAQGLKDKADRLAGDTTTKLSKLKEMNSNFNTNKKR
LEKLSTDIDDLNIRMDDYLQAIRDKSDSYFKCKT
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atggaacataatatatttggacttcttttattaatttcagttttaaatggtatacattgt
caacgtagcagacagcctcagtgtgagcaaggaagttgttacccagccacgggagattta
cttattgggagaaaaagtgaagaacaattgtacgcctcatcaacgtgtggttctaagaga
ccacagacctattgtattgttagtcatttagaggaggaaaagaagtgtttcagctgtgac
tctaggaccccgtggtcgcggcagaataatcagagtcatatgcttgaaaatgttgtatct
tcttttattggagacaattcttttagtggagacagaaagctacgctggtggcaggctgag
aatggaaaggagaatgtatatatacagttagatttagaggcagaattccattttactcat
ttaatcatgacttttaaatctttccgaccaaaggctatgcttgtcgaaagatctcatgat
ttcggcaaaacgtggaaagtttacaggtactttgcatataactgtaaaaagtcattccca
aatatttcccgagacccagtacaaaatcttacggatgtgatttgcgagacaagatattct
gatgtggaaccttcgacaggaggggaggtaattttccgagtgctgcccccgtttatcccg
gtccgtgatccttatagtgtcaatgtacagaacctgctgaagttaaccaacctccgaatt
aacattactgagctgcacacacttggtgacacccttttggataatcgtcgtgaaatcaaa
gagaaatactactacgccctgtacgacatgacggtgagaggaagttgcagttgctatggt
cacgctgccaactgtgtcccggtaccaggctacaacaacgaccccggaatggtacatggc
caatgtgaatgtacacacaacacaatgggacgtaactgtgagttatgtagggttggctac
aaggatgtcccctggcagcctgctagacacaaccaaccattcgagtgccagaagtgtaag
tgtaacaaccacgcggacgactgtaagtttgacccggcggtgtacgagcagtccggtaag
atcagcggtggcgtgtgtatcgactgtcgccataacactatgggcaagaactgtcaggaa
tgtcagacgttttactaccaggacccaaacaaggatattcgtgccccggacatctgtcag
ccctgtgactgtgaccctgatggagctcagtatagaggtaactgtgatagccacactgac
cccgcctacggcctggaggctggacgctgtacctgtaaacagtacgtcaccggtaaacgc
tgcgacgcgtgtaaggatggccactacaacctgaccacaaacaacccttacggttgtgat
acctgtatatgtaacactctcgggaccattggcaactacggctgtgataaagacagtggg
cagtgtttctgtaaaagatatgtgacgggcgtcaaatgtgacacatgttatcctggattc
tggaacctgagtggtgaggtgactggatgttctccctgtgactgtgacctgggaggggcc
gagtccgaggtctgtgactcccaggacggtcagtgtatctgtcgaccaaacatcggtggg
cgccagtgtaacaggcctgccactggctactacttctcactcctcgattacttcagatac
gaggcagaagatgcgaggggaatcgggaggacgaggctgtacactctgccatcctacaac
tactctatactaccctggagacaacagtggactggacagggcttcatgagggttagcgag
ggggacagcattgagttcaccgtcaataatattgacttccctatggactacgacattgtc
atcagatacaacccagcgatgcaagatatatgggaggatgtacgtgtttatgttgtccgt
cctggaccagtcaacgagtttggaccatgtgccaaccacatgccgtcagatgacgagaaa
gtaaccagccttatgacaaaccggagttacaccgtcgtgtctcccccagcctgtctagag
cctggcaaggaatacaccattaggcttgagttcctccgttttagaaccaatgctgaaaca
cctgatgcagccctcaatattgattcaattgtgctggtgcctagcctgaacactgtgccg
atcttctatggctcgggctaccctagcttcctgaaggaggagttccagcgctatggttgt
tacaactcccagttaaaggctttccaggaggagccccgagatttgtgttataacctcacc
ttcagtatttcctctgtactccacaacggagctctcgagtgtaactgtgactcaaccggc
tccgtagaccttgagtgtaacgttgctggcggtcagtgtcgctgtaagacaaatgttgtg
ggtcgacgatgtgaccgatgtgcaccaggaacttacgactttggacctgacggctgcaaa
ccctgtaactgcgttggggagggatctcaggacaacttctgtgacaaacagagtgggcag
tgtctctgtagacgtaacgtaggcggtaggatctgtgaccgctgtgtcgatggttactat
ggctaccctaactgtcgtccctgccagtgtaacggaaatgctgatacctgtaccaatgaa
ataggtgcctgtcttcagtgtcgtgactatacagtgggaaacaactgtgaatcatgtgcc
ccaggctaccacggtgacccacgtatcagttaccgtattccctgtgagccctgtttgtgc
cccggaggaccagacagccccatacagcatgctgactcgtgtagcgtagacccctattct
cgtaatctacagtgtaactgtagaccaggataccaagctccccgatgtgaccgctgtgct
gagaactacttcggccacccgagccagctgaacggtacatgtgaggcatgtatctgtaac
aacaacattgaccctgatgtacctgggggctgtaataccaccaccggacagtgtctcctc
tgtctcttcaacacggagggctttagctgtgagaggtgtaaaccagagtactatggtgat
gctactacacagagctgtaaagactgtgtctgtgatatttatggaactgaccgtaacggt
ggcccctgtgaccgagaaaccggccaatgtccttgtcttcccaacgtggaaggcatgagt
tgtgatcgctgtgcagtcggcttttggaacatcaccagtggagagggctgctcctcctgt
ggctgtgactccttgggctctctgggacccgagtgtaaccagtttgacggtcagtgtcaa
tgtaagccgggccgaggaggcctggactgcagtgagtgtccagctaatcactggggagac
cccactagagagtgttatccctgtgactgtgatggtcaaggatctagtcaaacccagtgt
gaccgtcgtactggtcagtgtgtgtgtctgaccggtatcactggctacaagtgtgaccgc
tgcgctagaggtaccaccggagaactgccaaactgtaagccgtgtggggactgcttcgat
aattgggaccgcatcattcgtgacctctccgcccagacttccggattgctggacgatgct
accaggattaaaacgacaggtgctgagagggcctttgataaggagtttagacagatggaa
gataacatggaggagatcagacagatcgttaacaatgccagtgtagcctccactgatatg
aaggatctggaggaccttctcaagcagctcaggcaaaacctgacagagagcatgaaccaa
ctggacagcacagagcagggtttggacaacaggatggacaatatccgacagggtaacaat
aacatccgtgccctacagacacgtgtcaatgatctcaaactcaaggctgaccagctcgtc
aaaaatgcctcggccatccgtgccaaggatgtggaaggtgcatttaacatcacaaaagag
gcgcaacagcgatcacagatggctcaagccaaaattgacaacactcaaaacatcatggat
gaatcggaacgtgtccgactggagacagaacggatgctggagcaaggacaggataggttt
gataaccagttggctgagaacaggaacaaccttgctaatcttgacacctcagttagtggt
ctgtcaaacaggatatccgacatcaatgaaatggtctgtgatgggcgtggtgacccttgt
gatgatatctgtgggggcggaggctgtgacaagtgtggtggtgtgggctgtgatgatgga
gctgtaactaaggctgaagacgccatcaaacttgccaaggatgcggagagtctgcttgcc
atgaaagaaaacgatgccaatgtactcctcagcagtatccagactgtacaacagggggct
gaggaggctaagaactcagcgaccatggcctacaatgccgcccttcgtgccaagaacgag
actgaggtgtcgcgtctcatgttggagacccttcttaacgaagtagctgacttcctgtca
ccatcttctggaacaccagaggcaataagagatattgccgacgaggtgctggccatgagc
atatctctgagtccacaacagattacagcactggctgatgagatcaacaaaactatccaa
ggtctccaggacattgatgtcattctcaacgcaacaagtgatgacttgaacctggcacag
aaactcaaaaaccaagctgaaatggcagaggcggatgctaagtccatattgggaaaggca
gaagatgttctagacaatctgcagagtgccacaagtgcccaggaggctgcagaccgcgca
atcaaccaggctgacagcgacatctcagatgcagaaagggatttaacacagattgagtca
gaaacggcagcagcagctgagaagtctaatcgttctctacaagctctagaggaactccgc
atccgactcatcacccttggtaacaagtacattggtaacgaccgtaaggtctttagagca
gaggaggccgctcgggccgcatccacattagccaccactgccgagatgaaagctgatgag
ctagccaacgagtacactgacacggccgacaagctcaataccaagtacaacctaacgtcc
gtggcccagcagcgggctcagggcctcaaggacaaagctgataggttggcaggcgacaca
acaaccaaactcagtaaactgaaagaaatgaatagcaactttaatacaaacaagaagaga
ttagagaaactttctacagacattgatgatttgaatattcgaatggacgactacctacaa
gcaatacgggacaagtctgatagctatttcaagtgtaaaacttag
DBGET
integrated database retrieval system
