Maylandia zebra (zebra mbuna): 101469542
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Entry
101469542 CDS
T02814
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X2
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04020
Calcium signaling pathway
mze04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101469542
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101469542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101469542
Ion channels [BR:
mze04040
]
Ligand-gated channels
Glutamate (ionotropic)
101469542
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
101469542
NCBI-ProteinID:
XP_014265646
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Position
LG12:33158747..33221083
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AA seq
905 aa
AA seq
DB search
MELCGVLLLAVLQCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKANAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNITALLLEAKDLEARVII
LSASEDEAALVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRLVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTR
LKIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtgcggcgtgctgctcctggccgtgctgcagtgctgctcggtggcgctgtgc
ggctgcgagccgcggctggtgaatgtgggcgccgtgctgagtcagaagcgatacgagcag
gtgttcaaggaggcggtgagtcaggccaacgctctgtacgggaaggacaagttcaagatg
aacgccatctccgtcacgcacaaggccaacgccatccagatggcactctctgtctgcgag
gacctcatctccaaccaggtgtacgccattctggtcagccatcctccacagtccaacgac
cacctgactccaacgcccgtctcctacaccgccggtttctaccgaatccccgtggtcggc
ctgacgacacgcatgtccatctactctgataagagcatccacctgtcgttcctgaggacg
gtgcctccatactcccaccaggcacaggtgtggttcgacctgatgagggagttcaggtgg
aatcacatcatcctgatcgtgagcgacgaccacgagggccgagccgcccagaagagactg
gagaccctgctggaggagcgtgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggctgagaaggtgctgctgttcagccag
gacaccaacattaccgccctgctgctggaggcgaaagacctggaggcccgagtcatcatc
ctctctgccagtgaagacgaagctgcgctcgtgtacaaagccgcccggcagctcaacatg
accggctccggttacgtctggctggttggagagcgggagatgaccggcaaagctctgagt
gaagctccagacggcctgctgggcctccagctgattaacggtaagaacgagtcggcgcac
atcgcggacgccgtggccgtggtggcgcagtctctgcaggagctgtttgagaaggagaac
atcactgaacctccacggggctgcgtgggaaacaccaacatctggaggaccgggccactc
tttaaacgggtgctgatgtcatcaaagtaccccgacggcctgacaggacgtatcgagttt
aacgacgacggcgaccggcgcttcgccacctacagcatcctgaactaccagcagaaacca
ggtcgcctcgtccaggttggagtctttaacggaacacaggttgtgatgaaccctcagagg
aaaatcatttggcctggaggagagacggagaagccagtcggataccagatgtcgaccaga
ctgaagatcgtgacgattcatcaggagccatttgtttacgtgaagccaacgaaaagcgac
gggacgtgtaaagaggagtacaccgtcaatggagtcctgatcaagaaggtgatctgtact
ggacccaacgggaccataccaggtcagcccatcgtcccgcagtgttgctatggtttctgc
atcgacctgctcatcaagctggccatgagtatgaacttcacctatgaggttcacctggtg
gctgatgggaagtttggcacgcaggagcgagtgaacaacagcaacaagaaggagtggaac
gggatgatgggggagctgctgggaggccttgccgacatgatcgtcgccccgctcaccatc
aacaacgagcgcgctcagtacatcgagttctccaaacccttcaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccag
agcacgctgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ctagaccggttcagcccgttcggaaggttcaaagtgaacagcgaagaagaagaggaagac
gccctcaccctgtcctcggccatgtggttctcgtggggagtgctgctgaactctgggata
ggagaaggagctcccaggagtttctcggccaggattctgggtatggtgtgggcagggttc
gccatgatcatcgtagcttcatacactgccaacctggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcgtaacccatcagataagttc
atctacgccacagtgaagcagagctcggtggatatctacttcagaaggcaggtggagctc
agcaccatgtaccggcacatggagaagcacaactacgagagcgccgccgaggccatccaa
gctgtgcgagacaataagcttcacgccttcatctgggacagcgccgtgctggagtttgag
gcgtcgcagaagtgcgatctggtgacgacaggagagctgttcttccgctccggattcggg
atcggaatgaggaaggacagcccgtggaaacagaacgtgtctctggctattctcagttct
catgagaacggcttcatggaggatctcgacaagacgtgggttcgataccaggagtgcgac
tccaggagcaacgccccggccaccctcactttcgagaacatggcgggtgtgttcatgctg
gttgctggaggcatcgtggctgggatcttcctcatcttcatcgagatcgcctacaaacgg
cacaaagacgcccgcaggaaacagatgcagctcgcctttgctgccgtcaatgtgtggagg
aagaacctgcagccgtacccgaccgacatcaccggccagctcaacctatcagatccctcc
gtcagcaccgtggtctga
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