Maylandia zebra (zebra mbuna): 101479063
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Entry
101479063 CDS
T02814
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04010
MAPK signaling pathway
mze04210
Apoptosis
mze04218
Cellular senescence
mze04620
Toll-like receptor signaling pathway
mze04621
NOD-like receptor signaling pathway
mze04622
RIG-I-like receptor signaling pathway
mze04623
Cytosolic DNA-sensing pathway
mze04625
C-type lectin receptor signaling pathway
mze04920
Adipocytokine signaling pathway
mze05132
Salmonella infection
mze05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101479063 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101479063 (nfkb1)
04218 Cellular senescence
101479063 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101479063 (nfkb1)
04621 NOD-like receptor signaling pathway
101479063 (nfkb1)
04622 RIG-I-like receptor signaling pathway
101479063 (nfkb1)
04623 Cytosolic DNA-sensing pathway
101479063 (nfkb1)
04625 C-type lectin receptor signaling pathway
101479063 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101479063 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101479063 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
101479063 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101479063 (nfkb1)
Transcription factors [BR:
mze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
101479063 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
101479063
NCBI-ProteinID:
XP_014264313
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All DBs
Position
LG2:complement(9374190..9404031)
Genome browser
AA seq
941 aa
AA seq
DB search
MAGDDHYLHTPNQMFDNIMIDPSWEFPHFAMPQTSLRTGESPAVDGPFLQIVEQPKQRGF
RFRYGCEGPSHGGLPGATSEKNRKTYPTVKICNYQGQARVVVQLVTALTPVPHLHAHSLV
GKQCDKGICIADLQSKDSTISFPNLGILHVTKKNVAKTLEERMIEAFKLGYNCGVSIHPD
IDSVQGEVRVPREITEHHLSVIRNAASSQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPV
VSEPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTW
EALGDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIL
DKEEVQRKRQKTLPNFQDFSGHGGGGLYRGGGGPAAGGGPGSTGYPGYQGFTTYNYGGGG
GGGGGFSTGYSAGLGGGGGGIKHASQSGAADNDGDDNDPDDDSPSGAVLRALARPEPVEV
SERSEEGGVSVEPEAEREFDAKEQLDQVISRLLEAIFQYSVTADSAYLLAPQRSLMAAQD
VNGDTGLHLAVLHNQQEALKSLTQVVSALPGEEVLNMRNRLYQTPLHLAVITQQKEAVEA
LLLAGADPTLTDRHGNTVLHLAAQHEGEGMIQFLLQHRELRELLDQTNTAGLCAIHLAVL
ANQLFSLRELLEGGANAEVQERSCGRTALHLATETDNVSLAGCLLLEGNAKVDCCTFNGS
TPLHIAAGRGSVKLTALLMAAGADPQKENFEPLFFREEDEEESCEKESEEEEDEGYIPGT
TPFNMAATPQVWDLLNGKEYKPKTPQTAFVPPQGDLASLDTEVKQALCGTLESEGCWENL
AHSLGLGILNTAFRLSPSPAKTLLDSYEVSGGTIRELLAALRSVGECRALSVLEEALHES
EEAPATSAMSGELLCARVQELKVDTRIDSGVCDSGVELSTA
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggccggagacgaccactacctacacactcccaaccagatgtttgataacatcatgata
gacccgtcatgggagtttccacattttgcgatgcctcagacgtctctgcggacaggtgag
agtcctgcagtggacggaccgttcctgcagatcgtggagcagcccaaacagcgcggcttc
aggttcaggtacggctgcgaggggccgtctcacggcggtctgccaggggccaccagcgag
aagaacaggaagacctaccccaccgtcaagatctgtaactaccagggtcaggcccgggtg
gtggtccagctggtgacggcgctgacccccgtccctcacctgcacgctcacagtctggtg
ggaaaacagtgcgataaaggaatctgcattgctgacctgcagtccaaagactccaccatc
agcttcccgaacctggggatcctccacgtgacgaagaagaacgtggcaaagactctggag
gagcggatgatcgaggccttcaagctgggatacaactgcggggtctccatccaccccgac
atcgacagtgttcagggggaggtcagagtccctcgagaaatcacagagcaccacctcagt
gtgatcagaaatgctgcctcttctcaggccaaagagatggacctcagcgtggttcggctc
atgttcacggcgttcctccccgacagcgacggcggcttctccaggcggctcgagcccgtg
gtgtccgagccgatctacgacagcaaggctccgaacgcctccaacctgaagatcgtgagg
atggatcggaccgccggctgcgtgaccggaggagaggaggtctacctgctctgcgacaaa
gtccagaaagatgacatccaggttcggttctatgaggaggatgactcgggtctcacctgg
gaggctctgggagacttctcccccacagacgtccacagacagttcgccattgtatttaag
acgccgaagtatcgagaccagaacctgcagaaaccgacgtctgtgttcgtccagctgaag
aggaagtccgacaacgagaccagcgagcctaaacccttcacctaccacccccagatctta
gacaaagaggaggtgcagaggaagaggcagaagactttacccaacttccaggacttcagt
ggtcatggaggaggaggtctatacagaggaggaggaggtccggctgctggaggaggacct
ggatccacaggatacccaggataccagggcttcactacctacaactatggaggaggaggt
ggaggaggaggaggtttctccacagggtactcagcgggtctgggaggaggtggaggaggg
ataaaacacgcctctcagagcggcgccgcagacaacgacggtgacgacaacgacccggac
gacgactcgccatcaggagccgtgctgcgagctctagcccggcccgaacccgtggaggtc
agcgagaggagcgaggagggaggggtcagtgtggagcctgaagcagagagagagttcgac
gccaaggagcagctggatcaggtgatcagcagactgctggaggccatctttcagtactcg
gttacggctgactcggcgtacctgctggctccacagcgctccctgatggccgcgcaggat
gtaaacggagacaccgggctccatttggctgttctccacaaccagcaggaggcgctgaag
agtctgacgcaggtggtgtctgccctgcccggagaggaggtgctcaacatgaggaaccgc
ctgtaccagactcctttgcacctggccgttatcacgcagcagaaggaggcagtggaagcg
ctgctgctggctggcgccgacccgacgctgacggatcgtcacggcaacacagtgctgcac
ctggcagctcagcatgagggagaaggaatgatccagtttttactgcaacacagagagctg
agagagctgctggaccaaaccaacacagcaggtctgtgtgcgatccacctggcggttctg
gccaaccagctgttttctctcagggagctgctggagggcggggccaacgcagaggtccag
gaacgcagctgtggccgaacggccctccatctcgccacagagactgacaacgtatcgctg
gcgggctgcctgctgctggagggaaacgccaaggtggactgctgcacttttaatggctcc
acccccctccacatcgctgcgggtcgaggctctgtcaagctcacggctctcctcatggct
gcaggtgcagacccacagaaggagaactttgagccactgttcttcagggaggaggatgag
gaggagagctgtgaaaaggagagcgaggaggaggaagatgaaggttacatcccagggaca
actcccttcaacatggctgccacccctcaggtttgggatcttctgaacggcaaagaatac
aaaccaaaaacacctcaaacggccttcgtccctcctcaaggcgacctggcgagcctggac
acagaggtgaagcaggcgctgtgtggcactctggagagtgaaggatgctgggagaatctg
gctcacagtctgggtctcgggatccttaacacggccttcaggctgagcccctcccccgct
aaaaccctgctggacagctacgaggtttccggtggaacgatcagggagctgctggctgct
ctgaggtcagtcggcgagtgcagagcactgagcgtcctggaggaggcgctgcacgagagc
gaggaagcgccggccaccagcgcaatgagtggcgagcttctgtgcgctcgggttcaggaa
ctgaaagtggacactcgaatcgacagcggggtctgcgacagtggggtggagctttccacg
gcgtaa
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