Maylandia zebra (zebra mbuna): 101486646
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Entry
101486646 CDS
T02814
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101486646 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101486646 (polr1a)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101486646 (polr1a)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101486646 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
CDC45
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
101486646
NCBI-ProteinID:
XP_024659978
LinkDB
All DBs
Position
LG2:complement(14192366..14225309)
Genome browser
AA seq
1686 aa
AA seq
DB search
MLFGKEVPWRRLEGMSFGIYSAEEIRKLSVKAITNFRFLDGVGNVAPNGLYDLALGPADI
KEVCSTCCQDFNNCPGHLGHIELPLPVYNPLFFDKLYLLIRGSCLACHMLTCPRAAMHLL
LNQLKLLDHGAMQEVYQIEQVLGQYMEENVKATVDEVVQVLQVFTDATVGMNAATSENTK
PIKHLVEKKGSLINDFWKIHMKTRKCPHCGCGRSTVRHEHNSKLIVTMPSGAQTSDKTEE
DLLRGKRVYMTASTAREHVNKVWEKEGFFLKCLFSGLEECMWSKEGGSSFYPDLFFLELL
VVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCDIIRKLLALIAGEKIVPETEAVEQTDQ
SFLSGILGATLTDKLYNVWVRLQSHVNIVFDSDMDKLMTEKYPGIRQILEKKDGLFRKHM
MGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GASMVINEDGRKTILSPTCLAQREAVAKELLTPSPGPRKMPMKIVNRHIKNGDVLLLNRQ
PTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVS
TDQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTKDQYTELVYRGLTDKPGRVKLLPP
AILKPQQLWTGKQVVSTLLLNVIPEKAVPLNLAGKSKIPSKAWIQVPPRATPGYQPESMC
DSQVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYR
GFTLGVEDILVKPGANKRRKKIIKESLKIGTKALQAAFNLPSNVDQAEAQSRWQDAHLNP
DQRDFITADHKFKEVANQVNNDINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPLMPSGKFLPCFQPYDPAPGAGGFVSGRFLTGIKPQEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
PRQFPFIEDNYEVIRRSQGLDEILARLDPQSATKHFAAIQRWKAKRELACPRSGAFLLFS
QKKLGKLKQTDEVEADCGRNPAVLQLVQQWHTLDEASRSKYCRKSSRCPEPSLGLFRPDV
CFGSISENFHGITEKYLQSRDTANQDRLDTNSLRQLLHYKWQRSLCDPGEAVGLLAAQSI
GEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNNKRALKRVK
VLRKKLARVCLAEVLQKVGVVETLRIENHHKLRVFKITFHFLPPERYSDDRLLSPQQILH
YMETRFFRLLLDAIKKRSAKLASIAVETRRATARDRDDDGNGAAASGGQLDDGEEEQERE
IVDDQENEGDTDASDAKRKGKQEEEVDYESEEEDNGDDPEDKEDQGVEEAEEETNAVEEP
QANGRRTEKRKKGEKRVEGAESQSEMRVNSVLESNAAIERYSYDHKHELWCEVDLALPVS
KVHFDLTSVLTSLAQNAVIMETKGLTRCLLSETTTKTGEKETVLNTEGINMHEIFKYSDI
LDINRLYSNEVHAMAKTYGIEVALKVIEKEIKNVFAVYGIEVDPRHLSLVADYMCYEGVY
KPLNRHAIRSNSSPLQQMTFETSYKFLKQATMLGSHDQLVSPSACLVVGKVVRGGTGLFE
LKQPLQ
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcggaaaagaagtgccatggcggcgtttggaaggcatgtcgtttggcatttac
tccgccgaagagataagaaagttgagtgtgaaagccatcactaacttcaggttcctggat
ggtgttggaaatgtggccccaaacggcttgtatgatctggctctgggaccagcagacatc
aaagaggtgtgttcaacctgctgtcaggatttcaacaactgcccaggccaccttggacac
atagagttacctctacctgtgtataatccattgttctttgataaactctacctgctgatc
cgtggctcgtgcctggcgtgtcacatgctaacatgtcctcgagcagccatgcacctgctg
ctgaaccagctcaagttattggaccacggagccatgcaggaggtctaccagatcgaacaa
gttctcggccagtacatggaggagaatgtcaaagcgactgtcgatgaggtcgtgcaggtg
ctgcaggtgtttacagacgccacagttggaatgaacgcagcgacttcagagaacaccaaa
cctattaagcacttggttgagaagaaaggcagtttgattaacgacttctggaagatccat
atgaaaaccaggaagtgtcctcactgcggttgtggcaggtctacagtgcgtcacgaacac
aacagtaagctgattgtcacgatgccatcaggagctcaaaccagtgacaaaactgaagaa
gatctgctgcgtggaaagagagtctacatgactgccagcactgctcgagagcacgtcaac
aaagtgtgggaaaaggaaggtttcttcctcaagtgtctgttctctgggctggaggagtgc
atgtggtccaaagaagggggaagcagtttctaccctgacctcttcttcctggagctgctt
gtggtcccgccatgcaggtatcgtccaatcaatcgcctgggtgaccagatgtttactaac
ggtcagacagtgaacatgcaggctgtcatgaaggactgtgacatcataagaaaactcctg
gccctcatagctggcgagaaaattgtcccggagacagaggctgtcgagcagacggaccag
tcgtttctgtccgggatcctgggagcgactctaacagataaactgtacaacgtgtgggtc
cgcctgcagagccacgtcaacatcgtctttgacagcgacatggacaaactgatgacagag
aaataccctgggatcagacagatccttgagaagaaagacggattatttcggaaacacatg
atgggcaaacgtgtggactacgccgcaagatctgtcatctgcccagacatgtacataggc
accaacgagataggaatacctatggttttcgccaccaagctgacctaccctcagccagtc
actccctggaatgtgaaggagctccggcaggccgttctcaacgggcccaacgtccacccc
ggtgcctccatggtgataaacgaggacggcaggaaaaccatcctctcccctacctgcctc
gcacagagggaggcggtggccaaggagctgctgacaccctctccaggtccacgcaagatg
cccatgaagatcgtgaatcgacacataaagaacggagatgttttgttgctcaacagacag
ccgactctgcacagaccctccatccaagcccactgtgcacgcatcttaccaggagagaag
gtgctgaggctccattatgccaactgtaaagcttacaatgctgactttgatggggatgaa
atgaacgctcacttccctcaaagtgagctgggccgagccgaggcctacacgttagtcagc
actgaccagcagtacctcgtccccaaggatggtaaacctttagcaggcctgatccaggac
cacatggtgtcaggaacaaggatgacaatacgaggctgcttcttcaccaaagaccagtac
actgagctggtgtacagagggctgactgacaaaccgggcagggtgaagttacttcctcca
gcaatactcaaaccacagcagctatggacgggaaaacaggtggtgtcgaccctcctgctg
aatgtgatcccagagaaagctgtgcctctcaacctggctggcaaatcaaagattcctagt
aaggcgtggatccaggtcccaccacgagccactccagggtaccaacccgagagcatgtgt
gactctcaggtggtgattcgtcagggggagctgttagttggggttctggacaaagctcat
tatggctcctcggcttacggtttggtgcactgctgctatgagctgtatggaggggaaacc
agcggcaaactgctcagctgtctggctcgactcttcactgcatacctgcagctctacaga
ggcttcactctgggtgtggaggacatcctggtaaaaccaggcgccaacaagcggaggaag
aaaattattaaggagtcgctgaagattggaaccaaagcgctccaggctgcttttaatctg
ccctccaatgtggaccaagccgaggctcagagtcgctggcaggatgctcacctcaaccca
gaccagagagacttcatcacggccgaccacaagttcaaagaagtggcaaaccaagtcaac
aatgatatcaacaaggtatgtatgccagttggactacacacctctttcccagacaacaac
ctccagctgatggtccaatcaggagccaaggggtctacagtgaacaccatgcagatttcc
tgtctgcttggtcagattgagttggagggccgtaggcctccactgatgccctctgggaaa
ttcttgccgtgcttccagccctacgaccctgcgcccggtgctggaggctttgtttctgga
agattcctcacaggcatcaaaccacaggagtttttcttccactgcatggctggcagagaa
ggactggtcgacacggccgtgaaaacatccagatcaggatatctgcaaagatgtgtcata
aaacatctggagggtttggtagtgcagtacgacctgacggtaagagacagcgatggctct
gtggtccagttcctgtacggcgaggacggactagatatccccaaaactcagttcctgcaa
ccaagacagttccccttcatagaagacaactatgaggtcatcaggaggtcgcagggcctg
gatgagattttagcacgtttagaccctcaaagtgccactaagcactttgctgccatccag
cgctggaaagcaaagagagagttagcatgtccacggagtggagcgtttttgcttttttcc
cagaagaagctgggaaaattaaaacagactgatgaagtagaggccgactgtggcagaaat
cctgctgtgctgcagcttgtacaacagtggcacactctggatgaagctagcagatccaaa
tactgcaggaagtcctcccgctgcccggagccgtcgctgggcctgtttaggcctgatgtc
tgctttggatcaatctctgaaaactttcatggcatcacagagaaatacctgcagagcaga
gacactgcgaaccaagacagactggacacaaacagccttcgccagctgctgcattataag
tggcagcgttcgctgtgtgacccaggtgaagctgtgggtctgctggcagctcagtccata
ggtgagccctccacccagatgactctcaacaccttccactttgctggcagaggagagatg
aacgtcactttgggaatacctcgtctgagagagatcctgatggtggccagcgccaacatt
aaaacccccatgatgagcgttccagtgctcaacaacaagagagctttgaagagggtgaaa
gtgcttcgtaagaagttggcccgggtgtgcctagctgaggtgctgcagaaggtgggtgtg
gttgagacgctgcgaattgaaaatcaccacaagctgcgggtgttcaaaatcaccttccat
ttcctgcctccagagcgctactctgatgataggctgttgtcaccgcagcagatcctccac
tacatggaaaccaggttcttccgtctcctcctcgacgccataaagaagcgctctgccaag
ctggcctccatcgctgtggagaccaggagggccaccgccagagacagggatgatgacggc
aatggagcagctgcctcaggagggcagttagatgatggagaggaagagcaggagcgagag
atcgttgacgaccaggagaatgaaggagatactgacgcttcggatgcgaagaggaaaggc
aaacaggaagaggaggtggactatgaaagcgaggaggaagacaatggcgatgacccagag
gataaagaggaccagggcgtggaagaggcggaggaggagacaaacgctgtggaggagcct
caggctaacgggaggagaacagagaagaggaagaagggagaaaaacgagtggaaggagca
gagtcgcagagtgagatgagagtgaactctgtgctggagtcaaacgcagccatagagaga
tacagctatgaccacaagcatgaactctggtgtgaggttgacctggcattacctgtgagc
aaggtgcactttgatctgacctcggtgctgacatcgctggcccagaatgccgtcatcatg
gagaccaagggcctgacgcgctgcctgctcagcgaaacgacaacaaagaccggagaaaag
gaaaccgttctgaacactgagggaatcaacatgcatgaaatcttcaagtacagtgatatc
ttggacatcaacagactgtactccaatgaggtgcacgccatggcgaagacatatggaatt
gaggtggctctgaaggtcatagagaaagagatcaaaaatgtctttgctgtctatggtatt
gaagttgaccccagacatctatcactggtagcagactacatgtgctatgaaggtgtatat
aagccactgaaccgacacgcaatccggtccaactcctctcctctgcagcagatgaccttc
gagaccagctacaaattcctcaagcaggccaccatgctaggatcacatgatcagctagtg
tcaccctcagcctgcctggtggtggggaaagtagtcagaggtggaacaggactctttgaa
ctgaagcagcctctgcagtag
DBGET
integrated database retrieval system
