Methanolobus zinderi: HWN40_03450
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Entry
HWN40_03450 CDS
T06665
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mzi
Methanolobus zinderi
Pathway
mzi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWN40_03450 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzi03021
]
HWN40_03450 (rpoB)
Enzymes [BR:
mzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWN40_03450 (rpoB)
Transcription machinery [BR:
mzi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HWN40_03450 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
zf-NADH-PPase
DUF1451
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
QLC51206
UniProt:
A0A7D5I2B7
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All DBs
Position
complement(676027..677841)
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AA seq
604 aa
AA seq
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MNEAKVFLNGELVGTHTDPVELVESIRKQRREGLISSQINVTLYEDIHEVIINSDMGRAR
RPLIVVEDGKSLVSQEEQEQIALGELTFDELLSEGKIEYLDSEEEENAFIGLYGEDVTEN
HTHLEINPGLMLGICTGMVPYPEHNASPRNTMGAAMVKQCIGVSTSNTKLRPDTRAHLLH
YPQKAMVRTQTCEAIHFDERPAGQNFVVAVMSYEGHNIEDALVFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEFRGARSPEAYANLDVDGLVNPETVVGPNDVLIGKTSP
PRFLEEQSDFGITVEQRRESAITMRSNEKGIVDTVLLTESINGTRLAKVKIRDQRIPEIG
DKFASRHGQKGVIGLIVPYNDMPFTEKGMVPDLVINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRINATAFSGEYEDDLRAGLREQGFAHTGKEVFFDGVTGKKIQADVFVGVILYQKLHH
MVASKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMTLKERLLDESDK
VVELVCGHCGMIATFDRKRNVRYCSNCGAETDIHPVEMSYAFKLLLDEIKSLGVAPRLQL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggctaaagtgttccttaacggagaacttgtgggaacacacacagatcctgta
gaactggtggaaagcatcaggaagcagcgcagagaagggctgatctccagccagatcaac
gtgaccctgtatgaggatattcacgaggtgataatcaactcggacatgggtcgtgcaaga
aggcctcttatcgttgtcgaggacgggaagtcacttgtaagccaggaagaacaggaacag
atcgctcttggagaactgacttttgatgagcttctcagcgaaggtaagatcgagtatctg
gattccgaggaagaagaaaatgcattcattggcctctatggagaagatgtcactgaaaac
catacccatctggagataaaccccggcctgatgctgggaatatgtaccgggatggtacct
tatccagaacacaatgcatcaccacgtaacacaatgggtgctgcgatggtaaagcagtgt
atcggtgtgtccacatccaacactaagctcagaccggacacccgtgcacaccttctgcac
tatccacagaaggcaatggtaaggacacagacatgtgaggctattcattttgacgaaaga
cctgcaggacagaactttgtcgttgcagtcatgtcctacgaaggacacaacattgaggat
gcactggtcttcaacaagggttccattgagagaggtcttggaagaagccacttcctgagg
acatttgagggtgaggaaagaagataccccggtggacaggaagacaagttcgagatcccc
gactctgagttcagaggtgcacgaagccccgaagcctatgcaaacctcgatgtcgacggt
ctcgtaaaccccgaaacagtcgtcggaccaaatgatgtgcttatcggaaagacaagtccc
ccgcgtttccttgaggaacagtcggacttcggtatcaccgtagagcagcgcagggaaagt
gcaattaccatgcgttccaacgagaagggtatcgtcgataccgtactgctcacagaatcc
atcaacggtaccagacttgcaaaagtaaagataagagaccagagaattcctgagatcggc
gacaagttcgcatccagacacggacagaaaggagtcatcggacttatcgtaccatataat
gacatgccgttcactgagaaaggaatggttcctgatcttgtaatcaatccacacgcaatc
ccttcacgtatgaccgtgggtcacgtgcttgagatgatcggtggcaaggtcggttccatg
gaaggaagacgtatcaacgcaacagcattctcaggagagtatgaggatgacctgcgtgca
ggactcagggaacagggattcgcacacacaggcaaggaagtattctttgacggagtgacc
ggaaagaagatccaggccgatgtgtttgtaggagttatcctttaccagaaactgcaccac
atggttgcatcaaagatgcacgcaaggtcccgtggtccggtacaggtgcttacacgccag
ccaaccgaaggacgtgcccgtgaaggaggtctgcgtttcggagaaatggagcgtgatgtg
cttatcggccatggtgctgcaatgacattgaaggaaagattactggatgaatcggacaag
gtggttgagcttgtatgcggccactgtggaatgatcgccacgttcgacaggaagaggaat
gtaagatattgttcgaactgtggtgctgagactgatatccatccggtggaaatgagctat
gcattcaaattactactcgatgagatcaagtcccttggtgtggctcccaggctgcagctc
gaggacgcggtgtga
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