Candidatus Nanopusillus acidilobi: Nps_00550
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Entry
Nps_00550 CDS
T04255
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
naa
Candidatus Nanopusillus acidilobi
Pathway
naa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
naa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nps_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naa03021
]
Nps_00550
Enzymes [BR:
naa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nps_00550
Transcription machinery [BR:
naa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Nps_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF5816
Auto_anti-p27
NOB1_Zn_bind
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AMD29601
LinkDB
All DBs
Position
101151..102953
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AA seq
600 aa
AA seq
DB search
MAYEVYVDSIFVGYVDDVNKFIEEFKEKRRKGIIPYFVNIHFDETRNVIEILTRKGRILR
PLIVVKDGKLLLTKEHIEKLKRGEIKWSDLEKEGIIEWVDPAEEENLNVALYPEDIKENT
THLELSSLVIFGIATSLVPFSNRNQSARLNRGVRPQRQAHAIYSLNFHNRFDTDISILYY
PQYPITRTFSFNIFKDDYAIGQNVIVAVMTQEGYNIEDAIIMNKGSIDRGLFRSVYFRSY
EIERLRYSGGLQDEITIPDPSVELYRGKDKYKNLEEDGIVSVESFVKPEEVLVGRVSPPR
FIGLTSESIATGLRKKDSSLTTGSGEEGWVDKVVITESDDGNLLVRIKLRDLRIPELGDK
FSVRHGQKGVLGMIVDPSDMPWSSSGLVPDIIFSPAGIPSRETVGLLLELLAGKIGSLNG
RYVDGTPWYGESEEELRKELLSLGFREDGTETLYNPLTGDEFKVKIFIGSIYYLRLKYMA
KNKLQARATGPVTLLTRQPTEGKSKKGGLKFSEMEHEVLAAHGASILLREMYSSDDTTIY
VCEKCGSLAVEDNIRNRVYCPVCGETEKISKVKVSYAFYLLLNELISLGIWPKLKLNYKF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgaggtttatgtagatagtatttttgttggatatgttgatgatgttaataaa
tttattgaagaatttaaggagaagagaagaaaaggtattattccatattttgtaaatata
cattttgatgaaacaaggaatgttatagagatattaacaagaaaaggaaggattttaaga
cctttgattgttgtaaaagatggaaagctattattaacaaaggagcatattgaaaaatta
aagagaggagaaataaaatggtctgatttagaaaaggaaggtataattgaatgggttgat
cctgctgaagaagaaaatttaaatgttgcattatatcctgaagatataaaggaaaataca
actcatttagagttatcttctctagtaatatttggtatagctacatctttagttccattt
tcaaatagaaatcaatctgcaagattaaatagaggtgttagaccacagagacaggctcat
gctatatattcattgaatttccataatagattcgatactgatatatcaattttatattat
cctcaatatccgattactagaacattttcttttaatatatttaaggatgattatgcaata
ggacaaaatgtaattgttgctgtaatgacacaggaaggatataatattgaagatgcaatt
atcatgaataaaggttcaatagataggggtttatttagatctgtgtattttagatcttat
gaaatagaaagattaagatattctggaggattacaagatgaaattacaattccagatcct
tctgtagaattatatagaggaaaagataaatataaaaatttagaagaagatggaattgtt
tctgtcgaatcatttgtaaagcctgaagaagttcttgttggtagggtatcacccccaaga
tttattggtttaacttctgaatctattgcaacaggtttaagaaagaaggattcttcatta
actactggtagtggggaagaagggtgggtagataaggttgtaataacagaatctgatgat
ggaaatttattagttaggataaaattaagggacttaagaattccagaacttggagataaa
ttttctgtaagacatggacagaaaggtgttttgggaatgattgttgacccatcagatatg
ccttggtcatcttcaggtcttgttccagatataatattttctcctgctggaattccttca
agagaaactgttggtttattattagaattgcttgctggaaagattggtagtttaaatgga
aggtatgttgatggaactccatggtatggagaaagtgaagaagaattaaggaaagaatta
ttatctttaggatttagagaagatggaacagaaacattatataatcctttaactggagat
gaatttaaagtcaaaatatttattggaagtatttattatttaagattaaaatatatggca
aagaacaaattacaagcaagagcaacaggtcctgttactttattaacaagacaaccaaca
gaaggtaaatcaaagaaaggtggtttgaaattcagtgaaatggaacatgaagttcttgct
gctcatggtgcttctatattattaagggaaatgtattcttctgatgatacaacaatttat
gtttgtgaaaaatgtggttctcttgctgttgaagataatataagaaatagggtttattgt
cctgtttgtggtgaaactgaaaaaatatcaaaagttaaggtttcttatgcattctactta
ttattaaatgaattaatttctcttggaatttggcctaagcttaagttaaattataagttt
taa
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