Candidatus Nanopusillus acidilobi: Nps_00560
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Entry
Nps_00560 CDS
T04255
Name
(GenBank) hypothetical protein
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
naa
Candidatus Nanopusillus acidilobi
Pathway
naa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
naa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nps_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
naa03021
]
Nps_00560
Enzymes [BR:
naa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nps_00560
Transcription machinery [BR:
naa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Nps_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Molybdopterin
NAC
Motif
Other DBs
NCBI-ProteinID:
AMD29602
LinkDB
All DBs
Position
105558..106676
Genome browser
AA seq
372 aa
AA seq
DB search
MSKIIKMELPEKIKKDLEKIEDEKLRKIVEDFSYKFIIDPGEPAGIVAAQSIAEPTTQMI
LRSFHFVGISAQQVSLGLPRITEITDAKKKMKQRYMIIRLLDEYKNDLNVVQNVAKKIKE
LLLEDLLSSITLDVFENKIIISLDKEKLKNEELTFDEVYRILKKKIKKYKVESDKQNIYV
IASKLSARELYLLKEMVKKILIKGIKGIKDATIYKDEKNNEYVIYTVGSNLLEIMKIPEV
DYTRVYTNDLREIEKVFGIEATRAAILQELVKLYEDQGLSVNVRHFMLVADMLTWYGTYL
GINRYGLHAEKESTLSKAAFETPISIFVRSSMMGQSDKVLSGIDNVIMNQPIYLGTGLYD
IYFVGNKKEDKE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaataataaagatggaactaccagaaaaaataaaaaaggatctagaaaaaata
gaagatgaaaaattaagaaaaattgtagaagatttttcatataaatttataatagatcca
ggtgaacctgctggtatagttgctgctcaatcaattgcagaaccaactacacagatgata
ttaagatcattccactttgtaggtatatctgctcagcaggtttctttgggtttacctaga
atcacagaaattactgatgcaaaaaagaaaatgaaacagagatatatgataataaggtta
ttggatgaatataaaaatgatttaaatgtagtccaaaatgttgcaaaaaagataaaggaa
ttattattggaagatctcttatcatcaataacattggatgtatttgaaaataaaataatt
attagtttggataaagaaaaattgaagaatgaagaattaacatttgatgaagtatataga
atattaaaaaagaaaataaagaaatataaggttgagagtgataagcaaaatatatatgta
attgcttcaaaattatctgctagggaattatatttgcttaaagaaatggtaaagaaaata
ttaataaaaggaataaaaggaattaaggatgcaactatatataaggatgaaaaaaataac
gaatatgtaatatatactgttggatctaatttattagaaattatgaaaataccggaggta
gattatacaagagtatatacaaatgatctaagagaaatagaaaaggtttttggaatagaa
gctactagagctgcaatattacaggaattagttaaattatatgaagatcagggtcttagt
gtaaatgtaagacactttatgttagtagcagatatgttgacatggtatggtacatattta
ggtataaatagatatggattacatgcagaaaaagaatctacattatcaaaagcagcattt
gaaactccaatttctatatttgttaggtcttcaatgatgggacagtctgataaggtatta
agtggaatagataatgttataatgaatcaaccaatatacttaggtacaggtttatatgat
atatattttgtaggaaataaaaaggaagataaggaataa
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