Candidatus Nanopelagicus abundans: B1sIIB91_03045
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Entry
B1sIIB91_03045 CDS
T05091
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nab
Candidatus Nanopelagicus abundans
Pathway
nab00260
Glycine, serine and threonine metabolism
nab00630
Glyoxylate and dicarboxylate metabolism
nab00785
Lipoic acid metabolism
nab01100
Metabolic pathways
nab01110
Biosynthesis of secondary metabolites
nab01200
Carbon metabolism
Module
nab_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B1sIIB91_03045
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1sIIB91_03045
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
B1sIIB91_03045
Enzymes [BR:
nab01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
B1sIIB91_03045
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Pyridoxal_deC
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
ASY23887
UniProt:
A0A249L4F3
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Position
complement(577699..580545)
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AA seq
948 aa
AA seq
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MTYRSDFASRHIGPNQYQIQTMLLELGYKDLDTFIKAVVPENIHIKGEIEKVLPAGISEV
AAIEEIAQIAKKNTVVKSFIGNGYYGTITPPVVLRNVLENPGWYTAYTPYQPEISQGRLE
AVFAFQTAITDLTGLAIANASMLDEATAAAEAMTLARRVWQGSDEAAFLIDVNLHSHVKA
VIKTRAKPLKIKVIENDLGKDLIPEGIFAAIIAYPDSYGRVKDLTNIVKDIQKQSALAIV
SCDLLALTLFKSPGEYGADIAVGSAQRFGVPVGFGGPHAGFMAVKNGLERSLPGRLVGQS
VDTHGNPAFRLALQTREQHIRRDKATSNICTAQVLLAVISAFYAMWHGPDGLAEIALRVQ
KFAYRFRGSLKKSGFDVDDYEIFDTIFLRSSKAEQITKTALAADFNIRMISKGELSVSFD
ETTTEADLLKLLKAFEAEDASEKSVNSVIKRGTTYLSHPLFNTYHSETAMLRYIRSLSDR
DLALDRTMIPLGSCTMKLNATSEMIPVTWPEFNLIHPFAPANQSEGYMQLIDSLSKWLIA
VTGYDAVSLQPNAGSQGEFAGLLAIRNYLDSRGEENRDICLIPSSAHGTNAASAVMAGMK
VFVIACDEDGNVSLSDLKEKIEEHRNNLAALMVTYPSTHGVFESAISQICELVHDAGGQV
YVDGANLNALVGVAKPGKFGADVSHLNLHKTFCIPHGGGGPGVGPVIARAHLAPFLPNHP
DNDLAGPKTGPGPVSGAPFGSASILPISWMYIRMMGGFGLTKATEVAILSANYLAKKIDP
LFPILYRGQNGHIAHECIIDIRPLTKSTGVTVDDIAKRLMDHGFHAPTVSFPVAGTMMIE
PTESEDIRELDRFLAAMESIRSEIAQIESGKITIEDSPLRHAPHTIGDLVSQEWDRKYSR
ENAAFPNGQEFGIGRAGKYLPTVGRIDGVYGDRNLVCSCLPIEELASN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgacataccgatctgattttgcatcccgtcatattggcccaaatcaatatcaaatccaa
acgatgctgcttgaacttggatacaaagatttagacacttttattaaagcagttgtgcca
gaaaatattcatattaagggtgagatagaaaaagtattgccagcaggtatctcagaggtt
gcagctatcgaagagatagcacaaattgctaaaaagaatacagttgtaaaatcttttatt
ggaaatggttactacggaactattacgcccccagttgtattaagaaatgttttggaaaat
ccaggctggtataccgcttacacaccatatcaaccagaaattagccaaggaagacttgaa
gcagtttttgcatttcaaactgcaattactgatctaactggcctagcaattgcaaatgca
tcaatgcttgatgaagcaactgcagcagccgaagctatgacacttgctcgcagagtttgg
caaggaagtgatgaagccgcattcttaattgatgtaaatttacactcacatgttaaagca
gtcattaaaactagagcaaagccattaaaaattaaggtaatcgaaaatgaccttggtaag
gatctaattcctgagggcatttttgctgccataattgcatatccagatagctacgggcga
gttaaagatttaactaatattgttaaggatattcaaaagcaaagtgcgctagcgatagtt
agttgtgatctactagcactgactctttttaagtctccgggggagtacggcgctgatatt
gcagttggctctgcgcaaagatttggtgtacccgtcggtttcggtggaccacatgcagga
tttatggcagtaaaaaatggattagaaagatcacttcctggtcgattagttggacaatca
gttgatacccatggcaaccctgcctttagattggcattacaaactagggaacaacatatt
cgccgggataaagcaacctcaaatatctgcaccgcacaagttttacttgcagtaatttct
gcattttatgcgatgtggcatggtccagatggtttagctgaaatagctttaagggttcaa
aaatttgcatacaggtttcggggtagtttaaagaagagtggctttgatgttgatgattat
gaaatatttgacaccatcttcctgcgcagctcaaaagctgaacaaatcactaaaaccgct
ctagcggcagattttaatatcagaatgatttcaaaaggagagctatccgtatcttttgat
gaaactacaaccgaagcagatttattaaagttgttaaaagcctttgaggcagaagatgcc
agtgagaagagtgttaattcagtaatcaaacgggggaccacttatttatctcatccacta
tttaacacatatcactccgaaacagccatgcttaggtatataagatcactttctgatcgc
gacttagcattagatcgaaccatgattcctcttggttcatgcacaatgaaattgaatgca
acctcagaaatgattccagttacgtggccagaatttaacttaattcatccatttgctcct
gctaaccaatctgaaggttatatgcaattaattgattctttaagtaaatggttgatagct
gttaccggctatgacgctgtctcactacaaccaaacgcaggttcacagggggagtttgca
ggtttgcttgcaattagaaactatcttgatagcagaggtgaagaaaatagagatatttgt
ctaataccttcaagtgcacacggtacgaatgcagcaagtgcggtaatggctggaatgaaa
gtttttgttatcgcttgtgatgaagatggcaatgttagtttaagtgatctaaaagaaaaa
attgaagaacatagaaataatcttgctgctctaatggttacctatccatcaactcatgga
gtttttgagagtgctatctcgcaaatctgtgaattagtacatgatgctggtggtcaggtt
tatgttgatggggcaaatctaaatgctttagttggcgtggcaaagcctggaaaatttggg
gctgatgtttctcatttaaaccttcataaaacattttgtatcccacacggtggcggggga
ccaggggttggaccagtaattgcaagagctcacttagctccatttttacctaatcaccca
gataatgatttggcaggtcctaaaactgggccaggtccggtctctggcgcaccatttggt
tcagcatcaattctgccaatttcttggatgtatataagaatgatgggcgggtttgggtta
acaaaagcaactgaagttgccattttatccgctaattatcttgctaaaaagattgatcca
ttatttccgattctttatcgtggtcagaatggacatatcgcgcatgaatgtattatcgat
atcaggccgctaactaaaagcactggtgtaactgttgacgatattgctaagcggttaatg
gatcatggttttcatgcacctactgtgagttttccagtagctggaaccatgatgatcgag
ccaacggaatctgaagatatcagggagcttgatagatttttagctgctatggaaagtatt
agaagtgaaatagctcagatcgagtctggcaaaattacgattgaagattcaccgctacga
catgcacctcacacaattggagatttggtttcgcaagagtgggaccgtaaatattcaagg
gaaaatgctgcatttcctaatggccaagagtttggaataggtcgcgctggaaagtatctg
ccaactgttggaagaattgatggtgtatatggagaccgaaatttggtgtgcagttgtctg
ccgatcgaggagttagcctctaactag
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