Nocardiopsis akebiae: KGD83_10005
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Entry
KGD83_10005 CDS
T08903
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
nake
Nocardiopsis akebiae
Pathway
nake00730
Thiamine metabolism
nake01100
Metabolic pathways
nake01240
Biosynthesis of cofactors
nake04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KGD83_10005 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
KGD83_10005 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nake03016
]
KGD83_10005 (thiI)
Enzymes [BR:
nake01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
KGD83_10005 (thiI)
Transfer RNA biogenesis [BR:
nake03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
KGD83_10005 (thiI)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QUX30791
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Position
complement(2311772..2313061)
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AA seq
429 aa
AA seq
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MSASLESAPLPAALAGSDAGLGELCVLMKLGEIVLKGSNRRLFERRLHNNIRASVRDLGE
IRLSQRGAGVIIVRKPEASDLEVAEIADRMANVMGVVRVHLVRRVPKDLDAVTDIGVRVM
EGRQGTFAVRARRRDKRFEMTSSELAGYLGSKIIEAHGYQVNLKRPDNTLFVEVDKDEAF
VFTDGVPGQGGLPAGMSGRGLVLMSGGIDSPVAAHRMIRRGLKVDFLHFSGMPFTGPESI
YKAYSLVRQLDRYQVGSRLFVIPFGKAQQQLKSSGIERLQIVAQRRLMLKTAEALADDLN
AECLITGDALGQVSSQTMTNLTALDDAVDLPILRPLIGMDKTEIMDQARRIGTLAISELP
DEDCCTMLTPRQVETAAKIPDLRQIEKRLDAEELAEHLVATAQVHKPSFLGDAAPKRVAP
ASASVAATA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcgcttgagtccgcgccgctccccgcagccctggccgggtccgacgccggg
ctcggcgagctctgcgtgctcatgaagctcggcgagatcgttctcaagggatccaaccgc
aggctgttcgagcggcgactgcacaacaacatccgcgcctccgtgcgcgacctgggcgag
atccgcctctcccagcgcggagcgggcgtgatcatcgtgcgcaagcccgaggcctccgac
ctggaggtcgccgagatcgccgaccgcatggccaacgtcatgggcgtggtccgggtgcac
ctggtccgccgcgtgcccaaggacctggacgccgtcaccgacatcggcgtgcgcgtcatg
gagggccgccagggcaccttcgccgtgcgcgcccggcgccgcgacaagcgcttcgagatg
acctcgtcggagctggccgggtacctgggctcgaagatcatcgaggcacacggctaccag
gtcaacctcaagcgccccgacaacaccctgttcgtcgaggtggacaaggacgaggcgttc
gtgttcaccgacggcgtgcccggccagggcggcctgcccgccgggatgagcggccgcggc
ctggtgctgatgtcgggcgggatcgactcccccgtcgccgcgcaccggatgatccggcgc
gggctcaaggtcgacttcctgcacttctccggcatgccgttcaccggcccggagtcgatc
tacaaggcctacagcctcgtccgccagctggaccgctaccaggtgggttcgcggctgttc
gtcatccccttcggcaaggcccagcagcagctgaagagctcggggatcgaacgcctccag
atcgtcgcccagcgccgcctcatgctcaagaccgccgaggccctggccgacgacctgaac
gcggagtgcctgatcaccggggacgcgctgggccaggtgtccagccagaccatgaccaac
ctgaccgccctggacgacgcggtggacctgccgatcctgcgtccgctcatcggcatggac
aagaccgagatcatggaccaggcccgccggatcgggacgctggccatctcggagctgccc
gacgaggactgctgcaccatgctgaccccgcgccaggtggagaccgccgccaagatcccg
gacctgcgccagatcgagaagcgcctggacgccgaggagctggccgagcacctggtcgcc
accgcacaggtgcacaagcccagtttcctgggcgacgccgcgcccaagcgcgtggcgccc
gcgtccgcttcggtggccgccaccgcctag
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