Nocardiopsis akebiae: KGD83_18320
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Entry
KGD83_18320 CDS
T08903
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nake
Nocardiopsis akebiae
Brite
KEGG Orthology (KO) [BR:
nake00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nake03051
]
KGD83_18320 (pafA)
Enzymes [BR:
nake01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KGD83_18320 (pafA)
Proteasome [BR:
nake03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KGD83_18320 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QUX27270
LinkDB
All DBs
Position
complement(4267057..4268415)
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AA seq
452 aa
AA seq
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MERRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSLVDLVAHDKAGERILEGLQVDAEQRLHEEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRHGEFGRLADVLIPFLVTRQIVCGAGKVLQTPRGALFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTTLLKLGSTDLVLRMIEAGVVM
RDYTLENPIRAIREVSHDMTGRRKVRLANGREASALEIQREYLDKVQSYVDRHGTDATGK
RVLELWQRTLEAVETQNLETVSREIDWVAKYLLLERYRDKHDLSLSSPRVAQLDLTYHDI
HRDRGLFYLLQSRGQMERVVGDLKIFEAKSVPPQTTRARLRGEFIRRAQEQRRDFTVDWV
HLKLNDQAQRTVLCKDPFKSVDERVEKLIAGM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgacggatcttcgggctggagaacgagtacggggtcacgtgcaccttccgggga
cagcgacggctgtccccggacgaggtcgcccgctacctcttccgcagggtggtctcctgg
gggcgcagcagcaacgtgttcctgcgcaacggcgcccgcctgtacctggacgtgggcagc
caccccgagtacgccacccccgagtgcgacagcctcgtggacctggtggcccacgacaag
gccggtgagcgcatcctggaggggctgcaggtcgacgccgagcagcgcctgcacgaggag
ggcatcgccggggacatctacctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctcgtgggacggcacggggagttcggacgcctggccgacgtg
ctcatccccttcctcgtcacccgccagatcgtctgcggcgccggaaaggtgctccagacc
ccccggggcgccctgttctgcgtcagccagcgcgccgagcacatctgggagggcgtctcc
tcggccaccacccgctcgcgccccatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgcttccggcgcctgcacgtcatcgtcggcgactccaacatgagcgagaccaccacc
ctgctcaagctgggctccaccgacctggtgctgcgcatgatcgaggccggggtggtcatg
cgcgactacacgctggagaacccgatccgggccatccgcgaggtcagccacgacatgacc
ggccgccgcaaggtgcgcctggccaacgggcgcgaggccagcgcgctggagatccagcgc
gagtacctggacaaggtgcagagctacgtcgaccggcacggcaccgacgccaccggcaaa
cgcgtcctggaactgtggcagcgcaccctggaggcggtcgagacccagaacctggagacc
gtctcccgcgagatcgactgggtggccaagtacctgctgctggagcgctaccgcgacaag
cacgacctgtccctgtcctcgcctcgggtggcccagctcgacctgacctaccacgacatc
caccgcgaccggggtctgttctacctgctccagagccgcggccagatggagcgggtggtc
ggcgacctcaagatcttcgaggccaagtcggtgccgccgcagaccacgcgggcccggctg
cgcggcgagttcatccggcgcgcccaggagcagcgccgcgacttcacggtggactgggtc
cacctcaagctcaacgaccaggcccagcgcacggtgctgtgcaaggaccccttcaagtcg
gtggacgagcgggtggagaagctcatcgccggtatgtag
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