Candidatus Nitrospira allomarina: PP769_03415
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Entry
PP769_03415 CDS
T09427
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03030
DNA replication
nall03410
Base excision repair
nall03420
Nucleotide excision repair
nall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP769_03415 (polA)
03410 Base excision repair
PP769_03415 (polA)
03420 Nucleotide excision repair
PP769_03415 (polA)
03440 Homologous recombination
PP769_03415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nall03032
]
PP769_03415 (polA)
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_03415 (polA)
Enzymes [BR:
nall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP769_03415 (polA)
DNA replication proteins [BR:
nall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PP769_03415 (polA)
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PP769_03415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP769_03415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WNM58829
UniProt:
A0AA96JZN5
LinkDB
All DBs
Position
796499..799357
Genome browser
AA seq
952 aa
AA seq
DB search
MPTVSEPSSPLPIRHVVLVDASGYIFRAFHAIKILNSPNGTPVNAVYGYITMLMKLLDDM
KPDHIAVIFDSARKTFRNDLAPSYKANRSEPPEELVPQFSLVREATRAFNFDCIELNGFE
ADDLIATYAKHAMEAGANVTIVSSDKDLMQLVSEQVSMFDPIKSRKIGPEQVLEKFGVPP
EKVVDVQSLAGDSTDNVPGVPGIGIKTAAQLIQEYGDLDTLLTRASEIKQNKRRESLIEH
ADKARLSRELVRLRSDVPLPFPLEQLERRQPNMDLLAAFLNEQGFKSILARLQSRVKGEQ
DPTVTPTATPVNSAPAAKDPETKPLPTKAQYELIQTVSALQGWVEEATRRGIVAVDCETT
SLDQTRAELVGFSLSLEPGQACYVPVGHVAPGSTSHQDLLSHDTSAALPERPEQIPLQQA
LDILGPLLTDPGVLKIGHNIKYDMVVFRRYGLNVSPVDDTMLLSYVLEGGMHGHGMDELA
EHFLGHTTIKFKDVTGTGKSQITFDQVPLEKALEYAAEDADVTLQLHQVLKPRLISEHMT
TVYETLERHLIPVLATMEKTGIKVDVSQLKQVSQEFSLRLRELEQEIHRLAGKTFNVGSP
KQLGEVMFDDLALGGGQKGKAGSYSTGVDVLDSLAAQGHELPSRVLEWRHLEKLRSTYAD
ALIRQINPDTNRVHTSYAMASAATGRLSSTDPNLQNIPIRTEEGRRIRRAFVAEPGWTLL
SLDYSQIELRLLAHVADIPVLKKAFWEGQDIHALTASQVFGIPLEQMDPGIRRKAKAINF
GIIYGISAFGLARQLSVEPGEAAAYIKTYFEQYPGIQDYMERTKQFCRQHGYVQTLFGRR
CHVPGIHDKNPARRNFSERAAINAPLQGTAADILKRAMIRVPAALAQHGLTPKAKMLLTV
HDELLFEVEEAAVEQTTAVIKQVMEAATLPALQLSIPLTVEAGHGPSWDKAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactgtgagtgaaccgtcttcccctcttccgattcgtcatgtcgtgttagtcgac
gcctcaggctatattttcagggcctttcatgccatcaagattttgaacagtccgaatggt
acccccgtcaatgccgtctatggatacatcaccatgctgatgaaactactggacgatatg
aaacccgatcatattgccgtcatctttgattccgcacgaaaaacctttcgaaacgatctg
gctcccagctacaaggccaatcgcagcgaaccacctgaggagttggtgcctcaattttct
ctcgtccgggaggcgacacgggcttttaattttgattgcattgaactgaacggtttcgaa
gccgacgatctgatcgctacctacgcaaaacatgccatggaagcgggcgcgaatgtgacc
atcgtgtcctcggacaaagatcttatgcagttagtatcagaacaggtcagtatgttcgat
cccatcaaaagccgaaagatcggtcccgagcaagttctggaaaaattcggtgtgccccct
gagaaagttgtcgacgtacagtcattggcgggagactccacggacaatgtgcccggggtc
ccgggtatcggcatcaaaacagccgcacaactcatccaggaatatggtgacctggacacc
ctccttacgcgcgcctcagaaatcaagcagaacaagcgacgggaaagcctcattgaacat
gccgataaggcccgactctcccgtgaattagtccggcttcgttccgatgtcccgctgcca
tttccgcttgaacaattggagcgacgccagcccaatatggatttattagctgccttcctc
aatgaacagggcttcaaatcgattctggctcgcttacaaagccgcgtgaagggtgaacag
gatcccactgtcacccctactgccacaccggtcaactctgcaccagcagcgaaagatccc
gaaacaaagccgctgcctaccaaagcccagtacgagttaattcaaacagtgtcggccctt
caaggctgggtggaggaggcgactcgtcgcgggattgtggccgtcgactgcgaaaccacg
tctctggatcaaaccagagctgaattggttgggttctcactgagcctggaacccggccag
gcctgttatgtacctgtcggtcatgtggccccgggatccacgtcgcatcaggatttgctc
tcacacgatacgtctgctgccttgccggaaagaccggaacaaattcccctccaacaggcg
ctcgacatccttgggccactgctgacagaccccggtgtgctcaagatcgggcacaatatc
aaatacgacatggttgtgtttcgccggtatggcctcaacgtgtctcccgtggacgatacc
atgctgctctcatacgtcttagagggaggcatgcatggccatggcatggacgaactagcc
gaacactttttgggccatacaacgatcaaatttaaggacgtcacgggtaccggaaagtct
caaatcacgtttgatcaggttcccctggaaaaagcgttggaatatgccgctgaagatgcc
gatgtgaccctgcagctccatcaggtcctcaaacctcgtctcatcagcgaacacatgacc
accgtctacgaaacgctcgagcgtcacctcattcccgtgctggccaccatggagaaaaca
gggatcaaagtcgatgtgtcccaactcaaacaggtcagccaggagttttctctccgtctc
cgggaattggaacaagagatccatcgcctggccggaaagacctttaatgttggttccccc
aaacaactcggcgaagtgatgtttgacgacctcgccttgggagggggtcaaaaaggcaaa
gccggcagctatagcacaggagtcgatgtcctcgattccttagcggcccaaggccacgaa
ctcccgtcacgtgtcttggaatggcggcatttggaaaaactgcgcagcacgtatgccgat
gcgctcatccgtcaaatcaatcccgacacaaaccgggtgcatacctcctacgccatggcg
tctgccgcaacgggaagactctcatccacagaccccaatctccagaacattcctattcgc
acggaagagggccgaagaatccggcgcgcctttgtcgcggagcctggttggacactgctt
tcgctggattattcacagattgaattgcgtctgctcgcccacgtcgcggatattcccgtt
ctcaagaaagccttttgggaaggccaggatattcatgccctcaccgccagccaggtcttc
ggcatccccttggaacagatggatcctggaattcgacgaaaagccaaggccatcaatttc
ggcattatttatggaatcagcgccttcgggttggcccgccaattgagtgtggagccgggc
gaggccgctgcttacatcaaaacctattttgaacagtatcccggcatccaggattacatg
gagcgcaccaaacagttttgccggcaacacggatacgtccagacattgtttggacgtcgg
tgccatgtccctggcattcatgataaaaatcccgccagacgaaatttctctgagcgagcg
gccatcaatgccccattgcaaggcacggcggccgacatcctgaagcgcgccatgatccgc
gtacctgcagcattggcacagcatgggctaacccccaaggcaaaaatgctattgaccgtc
cacgatgaattattattcgaggtagaagaagccgcggtcgagcaaaccactgcggtcatt
aaacaggtgatggaagccgccacactccctgccctacaattgtcgatcccgctgacggtc
gaagcaggacatggcccatcctgggacaaagcccattaa
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