Candidatus Nitrospira allomarina: PP769_09160
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Entry
PP769_09160 CDS
T09427
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall00521
Streptomycin biosynthesis
nall00523
Polyketide sugar unit biosynthesis
nall00541
O-Antigen nucleotide sugar biosynthesis
nall01100
Metabolic pathways
nall01110
Biosynthesis of secondary metabolites
nall01250
Biosynthesis of nucleotide sugars
Module
nall_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PP769_09160 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PP769_09160 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PP769_09160 (rfbD)
Enzymes [BR:
nall01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
PP769_09160 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WNM59905
UniProt:
A0AA96GGJ6
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All DBs
Position
2078154..2078990
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AA seq
278 aa
AA seq
DB search
MRQSRILITGAQGQLGQALQRQYADHEVTAWDLQDLDITQFEEVRKALDQLRPHIVINAA
AFTQVDEAEVKQDAAYRGNALGPRNLAVVTNDLGMTLIHFSTDYVFDGRQNRPYHEFDRT
NPLGVYGHSKLAGEEAVRVANPRHYIVRTAWLYHTVGKNFPSTICRMAGREVVKVVSDQY
GSPTFAPHLAQAVFQLGETDAFGTYHMAGTGGTSWYELAQTLYQALDIQTSVVPIATAQF
PRPARRPSYAVLTSLQDPLIKLPPWEEGVRDFASQWKG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagagtcgaattttaatcacaggggctcaagggcaattagggcaggcgctccaa
cggcaatatgccgaccacgaggtcacggcctgggacctccaggatttggatatcacacag
ttcgaggaagtcaggaaagcccttgatcaactccgaccacacatcgtcatcaatgcggcc
gcatttacgcaggtggacgaagcagaagttaagcaggatgccgcataccggggcaatgcc
ctgggcccaagaaatcttgccgtggtgacgaatgacttgggaatgactcttattcatttt
tccaccgattatgtgtttgatggtcggcagaatcggccctatcatgaatttgatcgtacg
aatcctttaggcgtctatgggcatagtaaattagccggtgaagaggctgtgcgggtcgcg
aacccacgacattatattgtgcggacagcttggctataccacactgtagggaagaacttc
cccagtacgatttgtcgaatggcgggccgagaggtcgtgaaagtcgtcagcgaccagtat
gggtcaccgacctttgcccctcatcttgcccaggcggtattccaattgggtgagaccgat
gcgtttgggacctatcatatggccggtaccggcggaacgagttggtatgaattggcccaa
acactctatcaggcgttggatattcaaacctcggttgtgccgatagcgactgctcaattt
cctcgcccggcccggcggccatcctatgcggtgctgacttctttacaggaccctttgatt
aagttaccgccctgggaagagggcgttcgcgattttgccagtcagtggaaaggctag
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