Novosphingobium aromaticivorans: Saro_0540
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Entry
Saro_0540 CDS
T00322
Name
(GenBank) short-chain dehydrogenase/reductase SDR
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar00362
Benzoate degradation
nar00364
Fluorobenzoate degradation
nar00622
Xylene degradation
nar01100
Metabolic pathways
nar01120
Microbial metabolism in diverse environments
nar01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Saro_0540
00364 Fluorobenzoate degradation
Saro_0540
00622 Xylene degradation
Saro_0540
Enzymes [BR:
nar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
Saro_0540
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Gene cluster
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Motif
Pfam:
adh_short
adh_short_C2
Epimerase
KR
Motif
Other DBs
NCBI-ProteinID:
ABD24987
UniProt:
Q2GAY6
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All DBs
Position
589371..590162
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AA seq
263 aa
AA seq
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MSEYGAHFAGRFDGKVMVVTGAAQGIGRGVAERAAAEGAQVLLVDRADFVTDVAAAIGPK
AHAFVADLEGHAGAAAAVAHGLAVFGRIDILINNVGGAIRMRPYDQFTSEQIDAEIRRSL
MPTLYCCHAVLPPMLAQGAGTIVNVSSNATRGIRRGPYSAAKGGINALTQSLAMEYGEQG
IRVVATAPGGTSAPARKVPRNAEGDSAQEQAWMAEAVEQVTRSTFMKRYGTLEEQIAPIL
FLASDEASYITGTVLPVAGGDLG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtacggggcgcatttcgcgggtcgttttgacggcaaggtcatggtcgtgacc
ggggcggcgcaggggatcgggcgcggcgtggcggagcgcgcggctgccgagggcgcacag
gtcctgctggttgatcgtgccgacttcgtgacagatgttgcggcagcgatcgggccgaag
gcgcatgcgttcgtggcagacctcgaggggcatgcgggcgctgcggccgccgtggcgcac
gggcttgcggttttcggtcggatcgacatcctgatcaacaacgtcggcggcgcgatccgc
atgcggccttacgatcagttcacgtccgagcagatcgatgccgaaatccgccgctcgctg
atgccgacgctctactgctgccatgcggtgctgccgccgatgctggcgcaaggggcgggg
acgatcgtcaacgtatcgtccaatgccacgcgtgggatacggcgcgggccgtactcggcg
gcgaagggcgggatcaacgctctgacccagagcctcgccatggagtatggcgagcaaggc
atccgcgtcgtcgccacggcgccgggcggcacgagtgcgcccgcacgcaaggttccgcgc
aatgccgagggcgacagcgcgcaggagcaggcttggatggcagaggcggtggagcaggtg
acccggtccaccttcatgaaacgctatggcacgctcgaggagcagatcgcaccgatcctg
ttcctcgcgtccgacgaggcaagttacattacgggaaccgtcctgcccgttgcgggcggt
gatctcggctga
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