Novosphingobium aromaticivorans: Saro_1234
Help
Entry
Saro_1234 CDS
T00322
Name
(GenBank) protocatechuate 4,5-dioxygenase beta subunit
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
nar
Novosphingobium aromaticivorans
Pathway
nar00362
Benzoate degradation
nar00624
Polycyclic aromatic hydrocarbon degradation
nar00627
Aminobenzoate degradation
nar01100
Metabolic pathways
nar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nar00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Saro_1234
00627 Aminobenzoate degradation
Saro_1234
00624 Polycyclic aromatic hydrocarbon degradation
Saro_1234
Enzymes [BR:
nar01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Saro_1234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ABD25679
UniProt:
Q2G8Z4
LinkDB
All DBs
Position
1285884..1286726
Genome browser
AA seq
280 aa
AA seq
DB search
MAKVIGGYFTSHVPGIGGAIVRGDQETPYWKPFFDGYPPIREWLVEARPDVAIVFSNDHG
LNFFLDKMPTFAVGAAERYDNADEGWGLPVYKSFAGHPALSWHLIDSLVRDEFDITTCQK
MLVDHAVSIPFELIYPGAESWPIKLVPISINTVQYPLPSPKRCLALGRAVGRALQSWAGD
ERVLICGTGGLSHQLDGPRAGFMNPDYDMFCLDNLAANPDALTGHTAEQVAELAGTQGVE
ILNWIAARGAMGDVPLHEVSRNYHIPISNTAAASLLLEPA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtcattggcggttatttcaccagccacgtcccgggcattggcggcgccatc
gttcgcggcgatcaggaaacgccttattggaagccgttcttcgatggctacccgcccatc
cgcgaatggctggtggaggcccggcctgacgtcgcaatcgtcttttccaacgaccacggc
ctcaacttcttcctcgacaagatgccgacctttgccgtcggtgcggcagagcgctacgac
aatgccgacgagggctggggcctgccggtctacaagagcttcgccggtcacccggcgctt
tcctggcacctgatcgacagtctggtgcgtgacgagttcgacatcacaacctgccagaag
atgctggtcgatcacgcggtttcgatcccgttcgaactgatctacccgggtgcggagagc
tggccgatcaagctcgtcccgatctcgatcaacaccgtgcaatatccgctgccgagtcct
aagcgctgccttgcgcttggccgtgcggtaggtcgcgcgctgcaatcctgggccggtgac
gaacgtgtcctgatttgtggtaccggcgggctttcgcatcagctggacggtccacgcgcg
ggtttcatgaacccggactacgacatgttctgccttgataatcttgcggccaatcccgac
gccctgaccggccataccgccgagcaggtagccgagcttgccggaacgcagggcgtcgag
attctcaactggatcgcggcgcgcggggcaatgggcgatgtgccgctgcacgaggtcagc
cggaactaccatatccccatcagcaatactgcggccgccagcctcctcctcgagcctgcc
tga
DBGET
integrated database retrieval system
