KEGG   Novosphingobium aromaticivorans: Saro_1856
Entry
Saro_1856         CDS       T00322                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar02020  Two-component system
Brite
KEGG Orthology (KO) [BR:nar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Saro_1856
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_1856
   02035 Bacterial motility proteins [BR:nar02035]
    Saro_1856
Enzymes [BR:nar01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Saro_1856
Secretion system [BR:nar02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Saro_1856
Bacterial motility proteins [BR:nar02035]
 Pilus system
  Pilus assembly proteins
   Saro_1856
SSDB
Motif
Pfam: T2SSE AAA_29 Zeta_toxin ABC_tran AAA_28 FtsK_SpoIIIE Mg_chelatase AAA_16 AAA_30 AAA_23 nSTAND3 DEAD CbiA AAA_19 cobW AAA_18 AAA_22 TrwB_AAD_bind Sigma54_activ_2 AAA_2 KAP_NTPase Pox_A32 Viral_helicase1 ATP_bind_1 AAA_7
Other DBs
NCBI-ProteinID: ABD26296
UniProt: Q2G777
LinkDB
Position
complement(1955826..1957391)
AA seq 521 aa
MSAFGRKNGIAGNSGGGRPSFGVARPMRGGEAGATGAAPSSASTPMPVPMPMPMGGDQFP
PIPSMEDMDAPSSAAALKADALSRLADRANAVAEGNYQAEGFEASVHKIKEQVLPRLLER
VDPEAAATLTKDELSEEFRPIIMEVLAELKVTLNRREQFALEKVLIDELLGFGPLEELLN
DPDVSDIMVNGPEQTYIEKKGKLQLAPIRFRDESHLFQIAQRIVNQVGRRVDQTTPLADA
RLKDGSRVNVIVPPLSLRGTAISIRKFSEKPITIDMLRDFGSMSDKMATCLKIAGASRMN
VVISGGTGSGKTTMLNALSKMIDPGERVLTIEDAAELRLQQPHWLPLETRPPNLEGQGAI
TIGDLVKNALRMRPDRIILGEIRGAECFDLLAAMNTGHDGSMCTLHANSPRECLGRMENM
ILMGDIKIPKEAISRQIAESVDLIVQVKRLRDGSRRTTNITEVIGMEGDVIVTQELFKFE
YLDETDEGKIIGEFRSSGLRPYTLEKARQFGFDQAYLEACL
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgagcgctttcgggcgaaagaacggcattgcaggcaattccggcggaggtcgcccctcg
ttcggcgtggcccgcccgatgcgtggaggcgaagccggggccacgggcgccgcgccgtcg
tcggcttccacgccgatgcccgtcccgatgcccatgccgatgggaggggaccagttcccg
ccgatcccgtcgatggaggacatggacgccccgtcgagcgcggctgccctgaaggccgat
gcgctgtcgcgcctggcggaccgcgccaacgcggttgccgagggcaattaccaggccgaa
gggttcgaagcctcggtccacaagatcaaggaacaggtgctgccgcgcctgctcgagcgc
gtcgatccggaagcggccgcgaccctgaccaaggacgagctgtccgaggaattccggccg
atcatcatggaagtgctggccgagctgaaggtcacgctgaacaggcgcgagcagttcgcg
ctggaaaaggtgctgatcgacgagctgctcggcttcggtccgctggaagagctgctcaac
gacccggacgtttccgacatcatggtcaacggacctgagcagacctacatcgaaaagaag
ggcaagctgcaacttgccccgatccgttttcgcgacgaaagccacctgttccagatcgcc
cagcgcatcgtcaaccaggtcggccgccgcgtcgaccagaccacgccgctggccgacgcc
cgcctcaaggacggcagccgcgtcaacgtgatcgtgccgccgctgtcgctgcgcggcacc
gcgatctcgatccgcaagttctccgaaaagccgatcacgatcgacatgctgcgcgacttc
ggctcgatgtcggacaagatggcgacctgcctcaagatcgccggcgcaagccgcatgaac
gtggtcatctcgggcggtaccggttcgggcaagacgacgatgctcaacgccctgtcgaag
atgatcgacccgggcgagcgcgtgttgaccatcgaggacgcggccgaactccgcttgcag
cagccgcactggcttccgctggaaacgcgtccgccgaaccttgaaggccagggtgcgatc
accatcggcgaccttgtgaagaacgcgctgcgcatgcgtcccgaccgcatcatcctgggc
gaaatccgtggcgcagaatgcttcgaccttctggcggcgatgaacaccggccacgacggg
tcgatgtgcacgcttcacgccaacagcccgcgcgaatgccttggccgtatggaaaacatg
atcctgatgggcgatatcaagatccccaaggaggccatcagccgccagatcgcggaatcg
gtcgacctgatcgttcaggtcaagcgcctgcgcgatggttcgcgtcgcacgaccaacatc
accgaagtgatcgggatggaaggcgacgtgatcgtgacgcaggaactgttcaagttcgaa
tatctggacgagaccgacgaaggcaagatcatcggcgagttccggtcctccggcctgcgc
ccatacactcttgaaaaggcgcgccagttcgggttcgaccaggcctatctcgaggcctgc
ctctag

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