Nocardioides aromaticivorans: CFH99_14475
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Entry
CFH99_14475 CDS
T07236
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
naro
Nocardioides aromaticivorans
Brite
KEGG Orthology (KO) [BR:
naro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
naro03009
]
CFH99_14475 (rimO)
Enzymes [BR:
naro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CFH99_14475 (rimO)
Ribosome biogenesis [BR:
naro03009
]
Prokaryotic type
ribosomal protein modification factors
CFH99_14475 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QSR26832
LinkDB
All DBs
Position
complement(2982828..2984276)
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AA seq
482 aa
AA seq
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MTSTPTPVSVALLTLGCARNDVDSEELAGRLAADGFTLVDDPEDADTVVVNTCGFVDAAK
KDSIDTLLAAADLKESGRPQAVVAVGCLAERYGEELASSLPEADAVLGFDDYQDISGRLR
SILAGEKPHPHTPRDRRLLLPISPAERQAVVETADFAGTEVDIAIPGRSAIRRRLDGGPM
APLKLASGCDRRCTFCAIPMFRGSFVSRRPSDVLQEAHWLAEQGVKELFLVSENSTSYGK
DLGDLGLLETLLPELAAVDGIERVRVSYLQPAETRPGLVRAIATTPGVAPYFDLSFQHAS
ATVLRRMRRFGDPESFLALLDQVRALAPEAGVRSNVIVGFPGETEEEFQTLCDFLVAARM
DVTGVFGYSDEDGTEAEKLDGKLDADEINARVQHLNDLVGELSAERAEERIGSTVEVLVE
EVDPDGTGDGTVEGRAAEQGPEVDGTTRVLGVPDAEVGDFVRAVVVASDGVDLIAEPAGG
RA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcactcccacacctgtctcggttgccctgctcaccctcgggtgcgcccgcaac
gacgtcgactccgaggagctcgccggccgcttggcggctgacgggttcaccctcgtcgac
gacccggaggacgccgacacggtcgtggtgaacacctgcggcttcgtcgacgcggccaag
aaggactcgatcgacaccctgctggcggcggccgacctcaaggagtcgggccgcccacag
gccgtcgtcgcggtgggctgcctggcggagcggtacggcgaggagctggcctcgtcgctg
cccgaggccgacgccgtgctgggcttcgacgactaccaggacatctccgggcggctgcgc
tcgatcctcgccggcgagaagccgcacccgcacaccccgcgcgaccggcggctgctgctg
ccgatcagccccgccgagcggcaggcggtcgtcgagaccgccgacttcgccggcacggag
gtcgacatcgcgatcccgggccgctccgcgatccggcgtcgcctcgacggtggcccgatg
gcgccgctgaagctggccagcggctgcgaccggcgctgcaccttctgcgcgatccccatg
ttccgcggctcgttcgtcagccggcggccctccgacgtgctgcaggaggcccactggctg
gccgagcagggcgtcaaggagctgttcctcgtctcggagaactccacctcctacggcaag
gacctcggcgacctcggcctgctggagaccctgctgcccgagctcgccgcggtcgacggc
atcgagcgggtccgggtgtcctacctgcagcccgccgagacccgccccgggctggtccgc
gcgatcgcgacgacgccgggtgtggcaccgtacttcgacctctccttccagcacgccagc
gcgaccgtgctgcgccggatgcgccgcttcggcgacccggagagcttcctcgccctgctc
gaccaggtccgcgcgctggccccggaggcgggtgtgcgctccaacgtgatcgtcggcttc
cccggtgagaccgaggaggagttccagaccctgtgcgacttcctcgtcgccgcgcggatg
gatgtcaccggcgtcttcgggtactccgacgaggacggcaccgaggccgagaagctcgac
ggcaagctcgacgccgacgagatcaacgcccgggtccagcacctcaacgacctggtcggc
gagctctcggccgagcgggccgaggagcggatcggcagcaccgtggaggtcctggtcgag
gaggtcgaccccgacggcaccggcgacggcaccgtcgagggacgtgccgccgagcagggc
cccgaggtcgacggcaccacccgggtgctcggcgtaccggacgccgaggtgggtgacttc
gtccgtgcggtcgtcgttgcctccgacggcgtcgacctgatcgccgaaccagcaggagga
cgggcatga
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