Nicotiana attenuata (coyote tobacco): 109225330
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Entry
109225330 CDS
T05870
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109225330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nau03021
]
109225330
Enzymes [BR:
nau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109225330
Transcription machinery [BR:
nau03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109225330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
109225330
NCBI-ProteinID:
XP_019245498
LinkDB
All DBs
Position
5:13254216..13277701
Genome browser
AA seq
1185 aa
AA seq
DB search
MEDQNEGKNKAMSRPHLLQEKDYSALKELFSHHIESFDHMVDNGLETMLLSIKPVEVLDS
FSKLKLRIWFGKPEIFPPQKERTSKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAV
IREKFNFGQFPIMLKSKLCHLRAADDSKKLTAHKEEPSEMGGYFILKGLERVIRLLILPK
RNYPMSMVRNSFRDRREGYSDKAVVIRCVREDQSAVSVKLYYLNNGSARLGFWIQGREYL
LPVGIILKALVDTTDHEIYVNLTCCYNEEYDRVKGSVGTQLVGERAKIILDEVQALSLFT
RAQCLQHIGEHFQPVMTGMQSYSYNTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSL
IDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLRLQRLLQEETDGEKKKFELSSL
ADVKKTIEKNAPKQMSLAIENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRA
VHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNIK
DFFKIRESILRVLTTIGMVPSAPKLVKGGPPEELSVLLDGRIVGSMRSDKIEEAVTYLRR
LKVSAISIPVDLEVGYIPLSMSGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDVELIGPF
EQVYMEISCPDGGDGGRKNVFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGK
QTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDM
EDAMVLNKSSVDRGLCHGHIYQTETIDLTEQSAKSDRAQRVFRRSYLDKSSHQLIDSDGL
PYVGQRINPHEPYCTIYNEITSQTTNMKLKGSEPVVVDYVAVDVKNKTHLQKANIRFRRS
RNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESI
AAKGGALHGKFVDATPFSNSMKDAESESSSLVDELGSMLTASGFNYHGVEVLYSGVYGTE
LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLA
HGAAYLLHDRLHTSSDHHIADVCSECGSILTASLIQPPKQKMQEEVRKISGLPPAREPKK
VTCLACRTSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNGAGA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaaaacgaaggaaagaacaaggcgatgtcacggccgcatttgttgcaagag
aaagattactcagcactgaaagagctcttcagccaccatattgagtcctttgatcatatg
gtcgataatggtcttgaaaccatgctgctcagtatcaagcccgttgaagtccttgattcc
ttttccaagctcaagctaagaatctggtttggaaaacctgaaatattcccacctcaaaag
gaacgaacttccaagaccatgcatgatgctttgtatccttttgagtgtcgacaagctaaa
ctttcatatacgggaaagtttttggtggatatttgcttccagtatggagatggagcagta
atcagagagaaatttaattttgggcagttccctatcatgttgaagtcaaagctatgtcat
ctgagagctgctgatgactccaaaaagttaactgctcacaaggaagagccatcagaaatg
ggcggatatttcattcttaaagggcttgagagagtcattcgccttctaattttgccaaaa
cgaaactatccaatgagtatggtacggaattcatttcgtgataggcgtgaagggtattcc
gataaagctgtcgttataagatgcgttagagaagatcagtctgcagtctcagttaaattg
tattatctaaataatggaagtgcaagacttggattctggatacaaggaagggaatacttg
cttcctgttggtatcatattaaaggcccttgttgacactactgatcatgaaatatacgtc
aatttaacatgttgctacaatgaggaatatgaccgagtaaagggatctgttggcacccag
cttgtcggtgaaagagcaaaaattattctggatgaagttcaagctttatctcttttcacc
cgagcacagtgcctccaacatattggggagcatttccaacccgttatgacaggaatgcaa
agttatagttacaatactgttgctgatgctgtgctaagagactacatatttgtccatctg
gataacaatcatgataaattcaatctacttatctttatgttgcagaagcttttttctctt
atagaccagacttctgtcctagacaatccagactctctgcaaaatcaagaagttttgctg
ccgggtcacttaattactatttatctcaaggaaaagctacaagactggctgcttagatta
caaaggttacttcaagaagaaactgatggtgaaaaaaagaagtttgagctaagtagcttg
gcagatgtcaagaagactattgaaaaaaatgctcccaaacagatgagcttggctattgag
aacatgttaaagactgggagattggttacacaatcaggtcttgacttgcagcagagagct
ggtatgacagttcaggcagagaggttaaatttcctccgtttcctttcacatttccgagca
gttcatcgaggtgcctcatttgctggccttcgtacgacaagtgtgcggaagttgttacct
gaatcttggggtttcctttgtcctgttcacacacctgatggggagccatgtgggttgctt
aatcatatgactgcatcttgccgcatcacgtcatactatgattcaaagggaaatattaaa
gacttcttcaaaatccgggaatccatattgcgcgtgttgactacaattggaatggtacca
tcagcgccaaagcttgtgaaaggtggcccccctgaagagctgtctgtcctactggatggt
cgtattgtgggcagtatgcgatctgataaaattgaagaagctgttacatacttgcgaaga
ttgaaagtgtcagcaatatcgatcccagttgatttggaggttggatacatcccgttgagc
atgagtggagcatatcctggtctatatctgttcacatctccttctaggtttgttcgtcct
gtaagaaatatctctgcgcctgctgaagagggcaatgatgttgaactcattggacccttt
gaacaggtgtatatggagataagctgcccggatggtggagatggaggaaggaaaaatgta
ttccctgccacacatcgagaaattcatccaactaatattttgagtgttgttggcaatctt
acaccttggtctgatcataatcagagtccacgtaatatgtatcagtgtcagatgggtaaa
caaacaatgggtttctcctcacaagcattaaactgtcgtgctgatcaaaagctatatcac
cttcagactcctcaaactccaattgtacgcacaaaagcttatgagaagtactgtgttgat
gactatccattgggaacaaatgcaattgtggcagttttggcttattcaggatatgacatg
gaggatgccatggtcttaaataaatcatctgtagatcgtggtttgtgtcatgggcatata
taccagacagaaacaattgacttgactgagcaaagcgccaaatctgatcgtgctcagagg
gtgtttagaagaagctatttggataagtcatctcatcagctgattgattctgatggtctt
ccatatgtggggcagaggattaatccacatgagccatattgtaccatttacaacgaaata
accagtcagacaactaacatgaagttgaagggttcagagcctgttgttgttgattatgtt
gctgtcgatgtgaaaaataaaacgcatctgcagaaggcaaacatacgttttaggcgctcc
aggaatcctgtaattggtgataaatttagcagccgacatgggcaaaagggtgtttgctct
caattatggcctgatgttgatatgccattctcaggagttacaggaatgaggccagatctt
attattaatcctcatgcattcccttcaaggatgacgattgctatgctattggagtcaatt
gctgctaagggaggtgctttacatggaaagtttgtcgatgcaacaccattttctaactca
atgaaggatgcagaatcagaatccagttcactggtggatgaacttggttccatgttaaca
gcttctggcttcaattaccatggtgtagaggtactatatagtggagtatatgggacagag
ctgacttgtgaaatatttattgggcctgtttattatcagcggctacggcacatggtttcc
gataaatttcaggtccgttctactggaacagtagaccaggtcacccggcagcccatcaag
gggagaaagcgtggtggaggtatccgctttggagaaatggaacgagactcactccttgct
catggagcagcatatttgctgcatgatagactccataccagctcagatcatcacattgca
gacgtgtgttctgaatgtggaagtatcctaacagcgtcactaatccagccaccaaaacaa
aaaatgcaagaagaagtgcggaaaattagtggtctgccacctgctagagaacccaaaaag
gtaacttgtcttgcttgccggacaagtaaaggaatggagactgttgcaatgccttatgtg
ttcaaatatctagcggctgaactggcagccatgaacatcaagatgaccctcaaactaagc
aatggggctggagcttga
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integrated database retrieval system
