KEGG   Nicotiana attenuata (coyote tobacco): 109231522
Entry
109231522         CDS       T05870                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109231522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nau03021]
    109231522
Enzymes [BR:nau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109231522
Transcription machinery [BR:nau03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109231522
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CENP-B_dimeris
Other DBs
NCBI-GeneID: 109231522
NCBI-ProteinID: XP_019252729
UniProt: A0A1J6J7R4
LinkDB
Position
1:102568438..102583516
AA seq 1218 aa
MTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDEDNDDNLDVAPIKE
LGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDSVGEIHVEPGYDPSKR
GDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYSARIMVETH
VLVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNRVDKPDCEF
DHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHI
KGVEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKK
CEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQHYLFPNLSGLKQKARFLGYMVKSLLH
AFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEH
YLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTG
KVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLEMLYRCGMQKLV
DDSATSLHGKQKVLLNGDWVGICEDSALFVSKLRRKRRRNELPHQVEVKRDEQQGEVRIF
SDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYLLK
ADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNI
RVDTNTHQLYYPQRPLFRTMLSDSLGKPKYAHSQKGMLPRPEYYNGQCAIVAVNVHLGYN
QEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIGRVDSL
DDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSL
RQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLLE
AALGKGIALGGSQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQNLIFMG
PTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLH
ERLFTLSDSSQMHICGKCKNMANVIQRSVQGGKVRGPYCRFCESVEDIVKVNVPYGAKLL
CQELFSMGISLKFDTEIC
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgacgacttctgatatcatggatgaagtgggatgtagtagtggtaaagggaagatatca
aatggatcagcgatgatggattttgatattgatgatctctttgaagtggatgatgatgat
tgggatgaggatgaggatgaggacaacgatgataatcttgatgtggctccaatcaaagag
ttgggtgaaggtttcttgaagaacttttgtaaaaaggcatcaactggtttttttgagaag
tatggcttgattagtcatcagattaattcctataatgacttcatcaactttggaatccaa
agggtgtttgactcggttggagagatccatgttgagccagggtatgatccatcaaagaga
ggtgatggtgattggaagcatgcttctgtgaagtttgggaaagtatcccttgagcggcca
aggttttgggcaggggaaaagttttctgtggacggtgggaaagagtacctggacttgtgg
ccacggcatgctcgccttcagaacatgacctactctgccaggattatggttgagactcat
gttctggtgtatactaaaaagctagttagaagcgacaagttcaaaaccggggtagaccag
tttgttgacaaggagtgtgagatggaagacaaaagggatgtcttgattgggagaatccct
gtgatggtgaactcggagttgtgctggatgaatcgtgttgacaagcctgattgtgaattt
gatcatgggggatatttcatagtcaaaggggctgaaaagaccttcatcgcacaggagcag
atctgtttaaaaagactctgggtgtcaaacagtcccacttggacggttgcatatcgccca
gttgcaaaaaggaatagagtttatattaaactggctgagaccttgaagcttgagcacata
aagggagtagaaaaggcccttactgtgtacttctcagtggcggaaatgccaatttggatt
ttgttttttgctctaggtgtatcctctgacagggaggtagtaaatttaattgatgtggat
attgaagatactaatattgtcaatatactagtagcttcaatccacgatgctgataagaag
tgtgaggatttcaggaaggggaaaaaggctctcgcttatgttgatagacttataaagggt
tgtagatttccacctcaagagtctgttgaggagtgcatacaacattatctgttccctaat
cttagtggtctcaagcagaaggctcgcttccttggctatatggtaaagtccctcttgcac
gcttttattggtcgcagaaaagttgacaacagagatgattttcggaacaagagattggag
ctggctggtgagctccttgaacgagagctcagggcgcacattaaacatgctgagaggcgt
atgctgaaggcaatgcaaagagatctttacggagatcgacaagttcaaccaattgagcac
tatcttgatgcatctattattacaaatggtctctccagggccttttccactggacactgg
tgtcacccttacaagagaatggagagggtctctggtgtagtagcaactattagacgaacc
aatcctttgcaaatgactgctgatatgaggaaaacacgtcagcaggttacatacactggg
aaggttggcgatgctagatacccgcatccttcacactggggaaaggtatgttttctctcc
accccagatggagaaaattgtggcctggtgaaaaacttggcgagtatgggtcttgtcagc
acaactattttgaaaccacttcttgagatgttgtaccggtgtggaatgcaaaagttagta
gatgatagtgccacctcacttcatggaaagcagaaggtacttttaaatggggattgggtt
ggaatatgtgaagattctgcactctttgtttcaaagctaagacgtaagcgccgcaggaat
gaattgccacaccaggttgaagttaagagagatgagcagcagggtgaagttcgcatattt
tctgatgcgggaaggattctgcgccctcttcttgttgtttcaaatctaaagaaaatcaaa
gctttgaaagggggagactatggctttcaatctcttctggacaatgggattattgagctt
ataggacctgaagaagaagaagactgtcgaactgcatggggagttgaatacctcttaaaa
gcagataaggagaacccacctgccaagtatacccattgtgagttagacatgtcattccta
ttaggcttgagctgtggtattatcccttttgcaaatcatgatcatgctaggagagtcctc
tatcagtctgaaaagcactctcagcaggcaattgggttttcaacagtgaatccaaacatt
agagttgatacaaatacccatcaattgtattatcctcagaggccgcttttccggacaatg
ttgtcagattcccttgggaagcccaaatatgctcatagccagaaaggaatgcttccacgg
cctgaatactacaatggtcaatgtgctattgttgcagtaaatgttcaccttggctataac
caagaagattcattggttatgaatcgtgcatcactggagcgtggaatgtttcggtcggag
catgttaggagctacaaggctgaggttgacaataaggaagctatcggaaagaagctaaag
attgaggattctgttaactttggtaaaacccagagtaaaattggacgagtggacagccta
gatgatgatggttttccattcattggggcaaatctccagagcggggatatcataattggg
aaatacgcagaatcaggggctgatcacagtgtcaagctgaagcatactgaaaggggtatg
gttcaaaaggttctgctctctgccaatgatgaagggaagaactttgctgttgtatctctg
agacaagttcgttctccatgtcttggagacaagttctccagcatgcatggacaaaagggt
gtccttggatttctggaatctcaggagaatttcccttttacagctcaagggattgttcca
gacattgtaatcaatcctcatgcatttccgtcaaggcaaacccctggtcagctgctggaa
gccgctttagggaagggtattgccctaggtggcagtcaaaaatatgccactccgttttcc
actttatcagttgatgccataatagagcagcttcatgggcgaggtttctcaaaatgggga
aatgagagagtttacaatggccgtacgggtgaaatggttcaaaacctgatcttcatgggc
ccaacattctaccaacgcctcattcatatggctgaagacaaagtgaagttccgtaatact
ggaccagtccatccccttactcgccaacctgtggcagacaggaaacgctttggtggaatt
aaatttggtgaaatggagcgtgactgtcttatagctcatggtgctgcagcgaacttgcat
gaacgccttttcacactcagtgactcctcccaaatgcacatctgtgggaagtgcaagaac
atggcaaatgtaatccagaggtctgttcaaggcggcaaggtaaggggtccttattgccgc
ttctgtgaatcagttgaagatatagtgaaggttaatgtgccatatggtgcgaagttattg
tgccaggagctcttcagcatgggcatatctctcaagtttgatactgagatttgctag

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