Nicotiana attenuata (coyote tobacco): 109233173
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Entry
109233173 CDS
T05870
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau00906
Carotenoid biosynthesis
nau01100
Metabolic pathways
nau01110
Biosynthesis of secondary metabolites
Module
nau_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
109233173
Enzymes [BR:
nau01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
109233173
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
Pyr_redox_3
HI0933_like
NAD_binding_8
Pyr_redox
FAD_binding_2
FAD_binding_3
GIDA
3HCDH_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
109233173
NCBI-ProteinID:
XP_019254498
UniProt:
A0A1J6HY80
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Position
10:complement(25400273..25402245)
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AA seq
500 aa
AA seq
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MDTLLKTPNKLEFLYPLDGFSVKASSFNSVKPHKFGSRKFCENWGKGVCVKASSSALLEL
VPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVVSIDPSPKLIW
PNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCI
LNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYNPGYQVA
YGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELREKNRKVPTFLYAMPFSSNRIFLEETS
LVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEYCVIPMGGPLPVLPQRVVGVGGTAGM
VHPSTGYMVARTLAAAPVVANAIIQYLGSEKDLFGNELSAAVWKDLWPIERRRQREFFCF
GMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLYLPELIFFGLSLFARASNTSRIEI
MTKGTLPLVNMINNLIQDTE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggatacattgttgaaaaccccaaataagcttgagtttttgtacccacttgatggattt
tctgttaaagctagctcctttaactctgtaaagccccataagtttggttctaggaaattt
tgtgaaaattggggtaaaggggtttgtgttaaggctagtagtagtgcccttttggagctt
gtacctgagaccaaaaaggaaaatcttgattttgagcttcccatgtatgacccttcaaaa
ggtcttgttgtagatctagctgtggttggtggtggacccgctggacttgcagttgcacag
caggtttcagaggctggactatcggttgtttcaatcgatccatcgccgaagttgatatgg
cccaataactatggtgtttgggtggatgaatttgaggccatggatttgttggattgcctc
gacgccacatggtcaggtactgttgtttatatcgatgacaacacaactaaagatcttgat
agaccttatggaagggttaataggaaacagcttaagtccaaaatgatgcagaaatgcata
ctaaacggtgttaaattccaccacgccaaagttataaaggtaattcacgaggaagctaaa
tctatgctgatttgcaatgatggtgtaactattcaggcaacggtggttcttgatgcaact
ggcttctcaagatgtcttgttcagtatgataagccatataatcctggatatcaagtagct
tatggcatattggcggaagtggaggaacatccctttgatacaagtaagatggttctcatg
gattggcgagattcacatcttggtaataatatggagctgagggagaaaaatagaaaagtt
ccaacttttttatatgccatgccattttcatcgaatagaatatttcttgaagaaacctca
cttgttgctcgtcctggattacgtatggacgatattcaagaaagaatggtggctcgttta
aatcacttgggtataaaagttaagagcattgaagaggacgagtattgtgtaattccgatg
ggaggccctcttcctgtattacctcagagagttgttggagttggtggtacagctggtatg
gttcatccctcaacaggttatatggtagcaaggaccctagctgcagctccagtcgtcgct
aatgcaataattcagtaccttggttctgagaaagacctttttggtaatgagttatctgca
gctgtttggaaagatttgtggcccatagaaaggagacgtcaaagagaattcttttgcttc
ggtatggatattcttctgaaacttgatttacccgctacgagaaggtttttcgatgccttt
tttgatctagaacctcgttattggcatggcttcttgtcatctcggctgtatcttcctgag
cttatatttttcgggctgtcccttttcgctcgcgcttcaaatacttctagaatagagatt
atgacaaagggaactcttcctttggtaaatatgatcaacaatttgatacaggatactgaa
tga
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