Candidatus Nitrosopelagicus brevis: T478_0003
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Entry
T478_0003 CDS
T03537
Name
(GenBank) DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T478_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nbv03032
]
T478_0003
Enzymes [BR:
nbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T478_0003
DNA replication proteins [BR:
nbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
T478_0003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJA92231
UniProt:
A0A0A7V228
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All DBs
Position
complement(1748..3223)
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AA seq
491 aa
AA seq
DB search
MDEEISSAVSYALNKGFQIHPDALEILHKIDVKELGQIIKDVVKEKTKQKQFLINEEDFE
IYLGIKDDEEHQVEFEILSDPTEKITSAEGVEGYGALFASRFNKLRQIMSDRPESKKVKD
IESVKSVTKNDDELYVWGLVTDRKSDRNITKITVEDPTSSMEIVVFEGDLKDAADTLLMD
QFAMFKIVPAKNGGFFAKDIILPDIPEHTTNRSKTETYAVFLSDLHVGSKFFMEEELSEF
IKWISSADPIARKIRFVVIGGDLIDGVGVFPGQDKVLDQLTTEDQLQKTFEVLDKIPKHI
KVFLISGNHDAGRKALPQPAIPKMYNSELWDRENFFMLGNPSMVSLNGVKVLMYHGQSID
DVVRTTPGVSYDKPAAVMRHFLRARHMSPIYGSRTPIAPETEDMMVIDDVPDIFHSGHVH
FVGLDMYKGVLIVNSGAWQRQTDFQESVGVTPTPGMAIIVNLQTMKVYQKDFRVRESDFI
EPKRVEPAPLS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatttcctcagcagttagttatgcgttgaataaaggattccagattcat
ccagatgcattagaaattttacataaaattgatgttaaagaattgggccaaatcatcaaa
gatgtagttaaagaaaagacaaaacaaaagcagtttttgattaatgaagaagattttgag
atttatctaggaattaaagatgatgaggaacatcaagtagaatttgagattttatcagac
cctactgagaagattacttcagctgaaggtgttgaaggctatggtgctttgtttgctagt
agatttaacaaattaagacagataatgtcagacagaccagaatcaaaaaaggtcaaagat
attgaatctgtaaaatcagttacaaaaaatgatgacgaactgtatgtgtggggattggta
actgatagaaaatctgatagaaatattacaaaaatcacagttgaggacccaactagctcc
atggaaattgttgtctttgaaggagacttgaaagatgctgcagatactttactcatggat
caatttgcaatgtttaagatagtcccagccaagaatggtggattttttgcaaaagacatc
atattaccagacattccagaacacaccacaaatcgctcaaaaactgaaacttatgctgtt
ttcctgtcagatttacacgtaggaagtaagttcttcatggaagaagaattatctgaattt
atcaagtggatttctagcgcagacccaatcgctcggaagatccgatttgttgtaatcgga
ggagatttgattgacggagtaggtgttttcccaggtcaagacaaggtgttagatcagcta
acaactgaagaccagctacaaaagacatttgaggttttagataagataccaaaacacatc
aaggtctttctcatatccggaaaccacgatgcaggaagaaaggcacttccacaaccagca
atcccaaagatgtacaattcagaattatgggatagggaaaacttcttcatgttaggaaat
ccatcgatggtttcgctaaatggagttaaggttttgatgtatcatggtcaatcaattgac
gatgtagttagaaccacaccaggagtgagttatgacaagccggctgccgtaatgagacac
tttctcagggctagacatatgagcccaatttatggaagtcgaaccccaattgcgcctgaa
actgaggacatgatggttattgatgatgtcccagacatcttccattctgggcatgttcac
tttgtaggcttggatatgtacaaaggagtactaatagtaaattctggagcttggcaaaga
cagactgattttcaggaaagtgtcggagtaacccctacaccaggaatggccatcatagtc
aatctacaaacaatgaaggtctaccaaaaggactttcgtgttcgagaatcagactttatt
gaaccaaaacgtgtagagcctgcaccacttagttag
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