Candidatus Nitrosopelagicus brevis: T478_1010
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Entry
T478_1010 CDS
T03537
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T478_1010 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nbv01007
]
T478_1010 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nbv03016
]
T478_1010 (lysS)
Enzymes [BR:
nbv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
T478_1010 (lysS)
Amino acid related enzymes [BR:
nbv01007
]
Aminoacyl-tRNA synthetase
Class I (A)
T478_1010 (lysS)
Transfer RNA biogenesis [BR:
nbv03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
T478_1010 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1
Anticodon_2
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJA92454
UniProt:
A0A0A7V066
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All DBs
Position
824179..825768
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AA seq
529 aa
AA seq
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MSEQNVIGKGTWIDKLASELIEREKQLGRDTSLIRVESGLGASGIPHIGSLGDAVRAYGV
KLALENMGYKSELIAYSDDLDGLRKIPAGFPDSLEEHIGKPVSLIPDHTGEHESYGMNMS
SRLLDGLEKLGIEYTFKRARDTYKEGLLQEQIHTILTQSERIGAKIEDLVGQEKYQKFLP
YFPVCAQCSRLYVAEATEYLPDERKVRYKCCDAEIGGKKIKGCGYEGEADIKKDLGKLAW
KVEFAARWSAFDIRFEAYGKDIMDSVKVNDWVADDVLNFPHPHHIKYEMFLDKGGKKISK
SLGNVVTSQTWLKFGTPESILLLLYKRITGARELGFEDIPSLMDEYNELEKIFFGKIKLD
NEAKLVKSKGLYEYVNLLSPPKQMPAQVSYRLLLELSKIFKEDRISRINKKLVDYRAIKE
TSPEIDRLIEMAGNFADEFDISDEIDIDIDSKIKGALSKLIIVLEKDGEIEDLQNEIYQI
AKGDDIEPKDFFKVLYQIILSTTRGPKIGPFILDIGKKNVAEKIGKYVK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagaacgttataggaaaaggaacatggattgacaaacttgcatcagaatta
attgaaagagagaaacaactaggtagagacactagtctaatcagagttgaaagtggatta
ggtgcatcaggtattcctcatatcgggagtttaggagatgcagttagagcatacggagta
aaacttgctttagaaaatatgggatacaaatcagaattaattgcatattcagatgacctt
gatggattaagaaaaattccagcaggatttccagattcacttgaagaacatattggaaaa
ccagtatcactaatacctgatcatacaggagaacacgaatcctatggaatgaatatgagt
agtaggcttttggatggattagaaaaattaggaattgagtacaccttcaaaagagcaaga
gatacctacaaagagggtttactgcaagaacaaattcatacaattttaacacaaagtgaa
agaattggagcaaaaattgaagatttagtcggacaggaaaaatatcagaaattcttacca
tatttccctgtatgtgcacaatgtagcagattgtatgttgcagaagccacagaatatcta
ccagatgaaagaaaagttcgttacaaatgttgtgatgcagaaattggtggaaagaaaatc
aaaggatgtggatatgaaggagaggcagatattaaaaaagatcttgggaaattagcatgg
aaagtagaatttgctgcaagatggagcgcgtttgatatcagatttgaagcatatggaaaa
gatatcatggattcagtcaaagttaatgattgggttgcagatgatgttttgaattttcca
cacccacaccacataaaatatgaaatgtttttggataaaggtggaaagaaaatatcaaaa
tcattaggcaacgttgtaacatctcaaacatggttgaaatttggaacgccagaatcaata
cttttgttactatacaagagaatcacaggtgcaagagaattaggatttgaggatatacca
tcacttatggatgaatacaatgaacttgaaaaaatattctttggcaaaattaaacttgat
aatgaggcaaaattggtaaaatcaaaaggattgtacgaatatgtcaatctattatcgcct
ccaaaacagatgccagctcaagtaagttatagacttcttttagaattatctaaaattttc
aaagaggatagaatttctagaataaataaaaaactagtagattaccgtgcaatcaaagag
acatcacctgaaattgacagattaattgagatggcaggaaactttgcagatgaatttgac
atatcagatgaaattgatatagatattgattcaaagatcaaaggtgcactaagtaaacta
attatcgttttagaaaaagatggagagattgaagatttgcaaaatgagatatatcaaatt
gcaaagggcgacgatatagaaccaaaagactttttcaaagtactataccaaattattttg
tcaactactagaggcccaaaaattggtccattcattttagatattggaaagaaaaacgta
gcagaaaaaattggcaagtacgtgaaataa
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