Candidatus Nitrosopelagicus brevis: T478_1407
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Entry
T478_1407 CDS
T03537
Name
(GenBank) putative modification methylase BspRI
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nbv
Candidatus Nitrosopelagicus brevis
Pathway
nbv00270
Cysteine and methionine metabolism
nbv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nbv00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
T478_1407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nbv03000
]
T478_1407
03032 DNA replication proteins [BR:
nbv03032
]
T478_1407
03036 Chromosome and associated proteins [BR:
nbv03036
]
T478_1407
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nbv02048
]
T478_1407
Enzymes [BR:
nbv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
T478_1407
Transcription factors [BR:
nbv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
T478_1407
DNA replication proteins [BR:
nbv03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
T478_1407
Chromosome and associated proteins [BR:
nbv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
T478_1407
Prokaryotic defense system [BR:
nbv02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
T478_1407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
4PPT_N
Motif
Other DBs
NCBI-ProteinID:
AJA91849
UniProt:
A0A0A7UYG3
LinkDB
All DBs
Position
complement(1160988..1162070)
Genome browser
AA seq
360 aa
AA seq
DB search
MKKPTVATLFAGGGGDSLGFTSAGFDLVFANDNNPDACETLRSRFENGSGKKIVHKGNVE
KIKNFGNANVITGGFPCQGFSLAGPREVKDKRNSLYQELKRAISLVNPEFFIGENVKGLV
TIGEKSKAKYFHNGKIVKLGKVAEAIIKELSEVGKGYNVSYQLHSAKDFGIPQDRERIII
VGVRKDINFEFKFPKPTHGKGLKPYVTMEEFGIKDIPLKDDEVFREAKGKRKDFFSSRYM
SRNRIRKWNETSFTIPAEASQVPAHPSSKKMWNVDVTGENRPKDSEWAEFRKKHEKDISK
SLVRLSWRQCAAIQGFPKDHPFSGDVVSIYKQIGNAVPPLLMQKVAECIMPYYKGKKSSY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaccaaccgttgctacactctttgcaggtggaggaggagattctcttggattt
acgtctgcaggatttgatctagtatttgcaaatgataacaatcctgatgcttgtgaaaca
ctaaggagtaggtttgagaatggttcaggaaagaaaattgttcataagggaaatgttgaa
aaaattaaaaattttggaaatgcaaatgtcataactggtggttttccatgtcagggattc
agtcttgcaggaccacgagaggtaaaagacaaaagaaacagtctatatcaagaattgaaa
agagcaatttctctagtaaatcctgaattttttatcggcgaaaatgtaaaaggtcttgtt
acaattggtgagaaaagtaaagcaaaatatttccataatggtaaaattgtaaagcttgga
aaggtcgcagaagcgataatcaaagaattatctgaggttggaaaaggttacaatgtcagt
taccaattacacagcgcaaaagattttggaataccacaagatagagaaagaataatcata
gttggtgtcagaaaagacattaattttgagtttaaattcccaaaacctactcatggaaaa
ggtttgaaaccatatgtcacaatggaagaatttggaatcaaagatatcccactaaaagat
gatgaagtttttagagaagcaaaaggaaaacgcaaggactttttttcatcacgatacatg
tctcgaaatagaattcgaaaatggaatgaaacaagttttacaattcctgccgaagctagt
caagttcctgcacacccatcctcaaagaaaatgtggaatgtagatgttacaggtgaaaat
agaccaaaagatagtgagtgggcggaatttagaaagaaacatgaaaaagatatctcaaaa
agtttggttcgtttgtcttggagacagtgtgctgctatccaaggatttccaaaggatcat
ccattttctggtgatgtggtttcaatttacaagcaaattggaaatgcggttccaccatta
ttgatgcaaaaggtagcagaatgcatcatgccgtattacaaaggtaagaaatcatcctat
tga
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