Sciurus carolinensis (gray squirrel): 124960568
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Entry
124960568 CDS
T08117
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04064
NF-kappa B signaling pathway
ncar04514
Cell adhesion molecules
ncar04668
TNF signaling pathway
ncar04670
Leukocyte transendothelial migration
ncar04933
AGE-RAGE signaling pathway in diabetic complications
ncar05143
African trypanosomiasis
ncar05144
Malaria
ncar05417
Lipid and atherosclerosis
ncar05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124960568
04668 TNF signaling pathway
124960568
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124960568
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124960568
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
124960568
05143 African trypanosomiasis
124960568
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124960568
05418 Fluid shear stress and atherosclerosis
124960568
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
124960568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncar04090
]
124960568
04091 Lectins [BR:
ncar04091
]
124960568
CD molecules [BR:
ncar04090
]
Proteins
124960568
Lectins [BR:
ncar04091
]
I-type lectins (Siglecs)
124960568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM1_3_5_D2
Ig_6
Ig_4
Ig_5
ICAM_N
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
124960568
NCBI-ProteinID:
XP_047375374
EnsemblRapid:
ENSSCRG00010001667
LinkDB
All DBs
Position
1:complement(119855326..119875324)
Genome browser
AA seq
739 aa
AA seq
DB search
MLGKMVVIFGASNIFWMVFAASQAFKIETSPESRTLAQIGDSISLTCSTIGCESPTFSWR
TQIDSPLNGKVRNEGTKSTLTMDPVSFENEHSYLCTATCGSEKLEKGTQVEIYSFPKDPE
IHFSGPLEVGKQVTVRCLIPDVYPFDRLEMDLLKGDYLMKNQDFLEDMDKKSLETKSLEV
TFTPVMEDTGKTLVCRAKLYIDETDSAPKEREAVKKLQVYISPKNTVISVHPSTRLQEGD
SVTMTCSSEGLPTPEIFWNKKLDKENLQLLSGNETLTLIAMRVEDSGTYVCEGVNPIGRS
QKEVELIVEEKPFTVDIFPGPQVAAQIGDSVVLTCRVTGCESPSFSWRTQTDSPLSGKVR
SEEMESMLTLSPVGFENEHSYLCTVTCGRRKLEKRVRVDLYSFPRDPEIEMSGLLVNGNP
ITVSCKVPNVYPFDHLEIELLNGETTLMNKYFLEEMDKKSLETKSLEITFIPTTEDTGKV
LVCRAKLHTGEMESEPKQRQSTQTLYVNVAPKETTVLVSPSSTLEEGSSVNMTCFSDGFP
APTILWSRQLSNGDLQQLSENTTLTLISTTVEDSGIYVCEGINQAGISRKEVELIIQVAP
KDIQLTVFPSESVKEGDTVIISCTCGNVPETWIILKKKAETGDTVLKSIDGAYTIRKVQL
EDAGVYECESKNEVGSQLRSLTLDVKGRDNDKDYFSPELLVLYCASSLIIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggaaaatggtcgtgatctttggagcctcgaatatattttggatggtgtttgca
gcttctcaagcatttaaaatcgagacctcccctgaatccaggactcttgctcagattggt
gactccatctccttgacttgcagcactataggctgtgagtccccgactttctcttggaga
acccagatagacagtccgttaaatgggaaggtgaggaacgaaggcaccaagtccacactg
accatggatcctgttagttttgagaacgaacactcttacctgtgcacagcaacttgtgga
tctgagaaactggaaaaaggaacccaggtggagatctactcttttcctaaggatccagaa
attcatttcagtggccctctggaggttgggaagcaggtcacagtcaggtgcttgatccct
gatgtatacccgtttgacaggctggagatggatttactgaaaggtgattatctcatgaag
aatcaggactttctggaagatatggataagaaatccttggaaaccaagagtttggaagta
acttttactcctgtcatggaggatactggaaaaactcttgtttgcagagctaaattatac
attgatgaaactgattctgcgcccaaagaaagagaggctgtcaaaaaactgcaagtctac
atctcacccaagaatacagttatctctgtgcatccctccacaaggctgcaagaaggtgac
tctgtgacaatgacatgttccagtgagggtctgccaactccggagattttttggaacaag
aaattagataaggaaaatctacaactcctttctggtaatgagactctcaccttaattgca
atgagggtggaagattctggaacttatgtatgtgaaggagttaatccgattggaagaagt
caaaaagaggtggaattaattgttgaagagaaaccatttactgttgacatcttccctgga
cctcaggtcgctgctcagataggggactcagttgtgctgacgtgccgcgtcacaggttgt
gagtccccatctttctcttggagaacccagacagacagtcctctgagtgggaaggtgagg
agtgaggaaatggagtccatgctgaccctgagccctgtgggttttgagaacgagcactct
tacctgtgcactgttacctgtggacggaggaaactggaaaaaagagtcagggtggacctc
tactcattccctagagatccagaaattgagatgagtggtctacttgtgaatgggaacccc
atcactgtaagctgcaaggttcctaatgtgtacccttttgaccatttggagattgaatta
cttaatggggagactactctgatgaataaatactttttggaggaaatggataagaaatcc
ctagagaccaaaagtttggaaataaccttcatccccaccaccgaggatactggaaaagtt
cttgtttgtcgggctaaattacataccggtgaaatggaatctgaacccaaacaaaggcag
agtacacagacactttatgtcaatgttgctccaaaggagaccactgtcttagtcagcccc
tcctccaccctggaggaaggcagttctgtgaatatgacctgcttcagtgatggctttcca
gctcccacaatcctgtggagcagacagctaagtaatggggatctacagcaactatctgag
aatacaactctcaccttaatttctacaacagtggaagattctggcatttatgtgtgtgaa
gggataaaccaggctggaataagcagaaaagaggttgaattaattatccaagttgctcca
aaagacatacaacttacagtgttcccttctgagagtgtcaaggagggagacactgtcatt
atttcctgcacatgtggaaatgttccagaaacttggataatcctgaagaagaaagcagag
acaggagacacagtgctgaagtctatagatggcgcgtacaccatccgcaaggtgcagttg
gaggatgcaggagtatatgaatgtgaatctaaaaatgaagtgggctcacaattaagaagt
ttaacgctggatgttaaaggaagagacaatgacaaggactatttttctcctgaacttctc
gtgctctattgtgcatcctccttaataatacctgccattggaatgatcatttactttgca
agaaaagccaacatgaaagggtcatacagtcttgtagaagcacagaaatcgaaagtgtag
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