Sciurus carolinensis (gray squirrel): 124962204
Help
Entry
124962204 CDS
T08117
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124962204
Enzymes [BR:
ncar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
124962204
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124962204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
124962204
NCBI-ProteinID:
XP_047377344
EnsemblRapid:
ENSSCRG00010011986
LinkDB
All DBs
Position
12:28001150..28064456
Genome browser
AA seq
391 aa
AA seq
DB search
MEPLRVLELYSGIGGMHHALRESCIPAQVVAAVDVNTVANEVYEYNFPHTQLLAKTIEGI
TLEEFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTNSFLYILSILPRLQNLPKYILLEN
VKGFEVSSTRDMLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQVSG
QVLMEFPKTEYEYTQKCAVDAENKIKKKKTEPSICFDSSMQCSGKDAILFKLETAEEIQR
KHKQDSDLSVQMLKDFLEDDIDTNQYILPPKSLLRYALLLDIVKPTCRRSTCFTKGYGSY
IEGTGSVLQTAEDVQIENIYKSLTNLPQEDKITKLSMLKLRYFTPKEIANLLGFPPEFGF
PEKITVKQCYRLLGNSLNVHVVAKLIKILCE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcccttgcgggtcctggagctgtacagcggcattggtggcatgcaccacgcactg
agagaaagctgtatacccgcacaagtggtagctgccgttgatgtaaacactgtcgctaat
gaagtatacgagtataattttcctcacacacagttactggcgaagacaattgaaggcatt
acactggaagagtttgacaaattatctttcaatatgattttaatgagccctccatgtcag
ccattcacacgaattggcttacagggtgatatgactgatccaaggacaaatagcttctta
tacattctaagtattctcccaagattacaaaatttgccaaagtatattcttttagaaaat
gttaaaggttttgaagtatcttctacaagagacatgttgatacaaacaatagaaaattgt
ggctttcagtaccaagaatttctgttatctccaacctctcttggcattccaaattcaagg
ctaaggtacttccttattgcaaaacttcagtcagagccattaccttttcaagtctctggt
caggtactgatggagtttcccaaaactgaatatgaatacacacaaaaatgtgcagtggat
gcagaaaataaaattaaaaaaaagaaaacagaacccagtatttgctttgatagcagtatg
caatgttctggaaaagatgccattctttttaagcttgaaactgcagaagaaattcaaaga
aaacataagcaggacagtgatctctctgtgcaaatgctaaaagattttcttgaagatgat
attgacaccaatcagtacattttgccaccaaagtcattactgcgatatgctcttttatta
gatattgttaagcccacttgcagacggtccacgtgctttaccaaaggttatggaagctac
atagaagggacaggatctgtgttacagactgcagaggatgtacagattgagaatatctac
aagtcccttactaatttgccacaagaagataagataacaaagttgtcaatgcttaaattg
cgatatttcactcctaaagaaatagcaaatctccttggatttcctccagagtttggattt
cctgagaagataacagtgaagcaatgttaccgtctacttggaaatagtctcaacgtgcat
gtagtagctaagctaatcaaaatcctttgtgaataa
DBGET
integrated database retrieval system
