Sciurus carolinensis (gray squirrel): 124968963
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Entry
124968963 CDS
T08117
Name
(RefSeq) beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00052
Galactose metabolism
ncar00511
Other glycan degradation
ncar00531
Glycosaminoglycan degradation
ncar00600
Sphingolipid metabolism
ncar00604
Glycosphingolipid biosynthesis - ganglio series
ncar01100
Metabolic pathways
ncar04142
Lysosome
Module
ncar_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
124968963
09103 Lipid metabolism
00600 Sphingolipid metabolism
124968963
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124968963
00604 Glycosphingolipid biosynthesis - ganglio series
124968963
00511 Other glycan degradation
124968963
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124968963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124968963
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
124968963
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124968963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
YfzA
Motif
Other DBs
NCBI-GeneID:
124968963
NCBI-ProteinID:
XP_047387747
EnsemblRapid:
ENSSCRG00010018654
LinkDB
All DBs
Position
17:35502127..35602378
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AA seq
655 aa
AA seq
DB search
MISALVRILSLLLAPLLLGSAHGLRNDSRRTFEIDYNKDRFLKDGQPFRYISGSIHYFRV
PRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPQPGQYQFSEDHDVEYFIKLAHELGLLVIL
RPGPYICAEWDMGGLPAWLLEKESIVLRSSDPDYLAAVDKWLGVLLPKMRPLLYQNGGPI
ITVQVENEYGSYFACDFDYMRFLQKRFRYHLGNDVLLFTTDGALKKFLKCGTLQGLYATV
DFGTGGNVTADFQTQRKVEPKGPLVNSEFYTGWLDHWGKPHSTVKTEVLASSLYDILTRG
ASVNLYMFIGGTNFAYWNGANTPYSPQPTSYDYDAPLSEAGDLTEKYFVLRKVIQMFEDV
PEGPIPPSTPKFAYGKVALKKLKTVEAALDILCPGGPIESLYPLTFTQVKQYFGFVLYRT
TLPQDCSDSSLYAPNDGVHDRAYVSVNGVPQGILERNSMIPLNITGKAGATLDLLVENMG
RVNYGRYINDSKGLVSNLTLNSSILTNWTIFPLDTEDAVRSRLGAWGDQGAGCHNKDCAD
SSSNYTLPAFYVGNFSIPSGIPDLPQDTFIQFSGWTKGQVWINGFNLGRYWPAQGPQMTL
FVPQHILTTSAPNNITVLELERAPCSTHGWEMCTVELVDKPIINRSVTHDGDFPQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgccctggttcgcatcctctctttgctgctggcgccgctgctgctgggttct
gcgcacggcttgcgcaatgactccaggaggacttttgagattgactacaacaaggaccgc
ttcctcaaggatggccagccattccgctacatctcagggagcatccactacttccgggta
ccccgcttctactggaaggaccgactgcttaagatgaagatggctgggctgaatgccatc
cagacgtatgtgccctggaactttcatgagccccagccaggacagtaccagttttctgag
gaccatgatgtggaatatttcattaaactggctcatgagctgggactgcttgtcatactg
aggcctgggccctacatctgtgcagagtgggacatgggaggattacctgcttggttatta
gagaaagaatctattgttcttcgctcttctgacccagattacctggcagccgtggataag
tggttgggagtccttctgcctaagatgagaccactcctctatcagaatggagggccgatt
ataacagtgcaggttgaaaatgaatatggctcctactttgcctgtgattttgactacatg
cgtttcctgcagaagcgcttccgctaccatctcggtaacgatgtgcttctgttcaccact
gatggggcacttaaaaagttcctgaagtgtgggaccctgcagggcctctatgccacagtg
gactttggaacaggtggcaacgtcacagccgatttccaaactcagaggaaagtggagccc
aaaggacccttggtcaattctgaattctatactggctggttagaccattggggtaagcct
cactccacggtcaagacggaagtcctggcttcctccctctacgatatactgacccgtggg
gcaagtgtgaacttgtacatgtttataggtgggaccaattttgcctattggaatggggcc
aacacaccctattcaccacagcctaccagctacgactatgatgccccactgagtgaggca
ggggacctcactgagaagtattttgttctgcgaaaggttatccaaatgtttgaagatgta
cccgaaggtccgatccctccatccacaccaaagttcgcctatggaaaagttgctctgaaa
aagttaaaaacagtggaggcagctctggacatcttgtgtcctggtggacccatagaaagc
ctttatcccttgacatttacgcaggtgaaacagtattttgggttcgtgctgtaccgaaca
acactcccccaagactgtagcgactcgtccctctacgctcccaatgatggagtccacgat
cgggcctatgtctcagtgaatggggtcccccaaggaatccttgagcgaaacagtatgatc
cctctgaatataacagggaaagctggagccaccctggacctcctggtggagaacatgggg
cgtgtgaactacggcagatatatcaacgattctaagggtttggtttctaacctgaccctc
aactccagtatcctcacaaactggacaatcttcccgctggacaccgaggatgcagtgcgc
agccgcctgggggcctggggtgaccagggcgctggctgccacaacaaggactgcgctgac
agttcgtccaactacacgctgccagccttttatgtgggcaacttttccatccccagcggc
atccctgacttgccccaggacaccttcatccagttttctggatggaccaaggggcaggtg
tggattaacggctttaaccttggccgctattggccagcccagggcccccagatgaccttg
tttgtgccacagcacatcctaacgacctcggccccaaacaacatcacggtgctggaactg
gagcgtgcgccctgcagcacccatggctgggaaatgtgtaccgtggagctggtggacaag
cctattatcaacagatctgtgacccacgatggtgacttcccacaatag
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