Sciurus carolinensis (gray squirrel): 124978039
Help
Entry
124978039 CDS
T08117
Name
(RefSeq) cell migration-inducing and hyaluronan-binding protein isoform X1
KO
K19031
cell migration-inducing and hyaluronan-binding protein [EC:
3.2.1.35
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124978039
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
124978039
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Hyaluronan
Cell surface receptors
124978039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILEI
G8
Mucin2_WxxW
Motif
Other DBs
NCBI-GeneID:
124978039
NCBI-ProteinID:
XP_047398007
EnsemblRapid:
ENSSCRG00010005441
LinkDB
All DBs
Position
2:50799720..50975694
Genome browser
AA seq
1365 aa
AA seq
DB search
MGAASRLDSFKALNFRTVLTVSWLILVRFLGATATVPAECPDQNPELQPWNPGHDQDHHV
HIGQGRMLLLTSSATFHSIDISEGGKLVIKDHDEPIVLRTRHILIDNGGELHAGSALCPF
QGNFSIVLYGRADEGVQPDPYYGLKYLGVGKGGTLELHGQKKLSWTFLNKTLHPGGMEEG
GYFFERSWGHRGVIVHVIDPKSGTVIHSDRFDTYRSKKESERLVQYLNAVPDGRILSVAV
NDEGSRNLDDMARKAMTKLGSKHFLHLGFRHPWSFLTVKGNPSSSVEDHIEYHGHRGSAA
ARVFKLFKSEHGEYFNVSSSSEWVQDVEWTEWFDHDKVSPTKGGEKISDLRVAYPGKICN
RPIDIQATTMDGVNLSIEVVYKRGQDYRFACYHQGQACQSYRVRFLCGKPVRPKLTVIID
TNVNSTILNLEDDVRSWKPGDTLVVASTDYSMYQAEEFQVLPCKTCTANQVKVAGKPLYL
HIGEEMDGVDMRAEVGLLSRNIVVMGEMEDKCYPYSKHICNFFDFDTFGGHIKLALGFKS
AHMEGVELKHMGQQLVGQYPIHFHLAGDVDEKGGYDPPTYIRDLSIHHTFSRCVTVHGSN
GLLIKDVVGYNSLGHCFFTEDGPEERNTFDHCLGLLVKSGTLLPSDRDSKMCKTITEDSY
PGYIPKPRQDCNAVSTFWMANPNNNLINCAAAGSEETGFWFIFHHVPTGPSVGMYSPGYS
EHIPLGKFYNNRAHSNYRAGMIIDNGVKTTEASAKDKRPFLSIISARYSPHQDADPLKPR
EPAIIKHFTAYKNQDHGAWLRGGDVWLDSCQFADNGIGLTLASGGTFPYDDGSKQEIKNS
LFVGESGNVGTEMMDNRIWGPGGLDHSGRTLPIGQNFPIRGIQFYDGPINIQNCTFRKFA
ALEGRHTSALAFRLNNAWQSCPHNNVTNIAFEDVPITSRVFFGEPGPWFNQLDMDGDKTS
VFHDVDGSVSEYPGSYLTKDDNWLVRHPDCINVPDWRGAICSGRYAQMYIQAYKTSNLRM
KIIKNDFPTHPLYLEGALTRSTHYQQYQPVITLQKGYTIHWDQTAPAELAIWLINFNKGD
WIRVGLCYPRGTTFSILSDVHNRLLKQTSKTGTFVRTLQMDKVEQSYPGRSHYYWDEDSG
LLFLKLKAQNEREKFAFCSVKGCERIKIKALIPKNAGVSDCTATAYPRFAERAVVDVPLP
RKLLGAQLKTKDHFLEVKMESSKQHFFHLRNDFAYIEVDGKKYPSSEDGIQVVVIDGSQG
HVVSHMSFRNSILQGIPWQLFNYVAAVPDNSIVLMVSKGRYITRGPWTRVLEKLGADKGL
KLKEKMAFVGFKGTFRPTWVTLETDDHTAKIFQVVPIPVVRKKKL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgccagcagactggattccttcaaggccttgaacttcaggactgtgctgaca
gtcagctggctgatcctggttcgcttccttggggccacggccacagtgccagcagagtgc
cctgaccagaaccctgaattgcagccctggaaccctggccatgaccaggaccaccatgtg
cacatcggtcagggcaggatgctgctgctcacctcttctgccacgttccactccattgac
atttcagagggaggcaagttagtcattaaagaccatgatgagcccattgttttgcgtaca
cgacacatcctgattgacaacggaggagaacttcatgctggtagtgccctctgccctttc
cagggaaatttcagcatcgtgttgtacggaagggctgatgaaggtgttcagccagaccct
tactatggcctgaagtatcttggagttggcaaaggaggtacccttgagttgcatggacag
aaaaaactctcctggacatttctgaacaagacgcttcacccaggtggcatggaagaagga
ggctatttttttgaaaggagctggggccaccgtggagtcattgttcatgtcatcgacccc
aagtcaggcacagttatccattctgaccggtttgacacctacagatcgaagaaagagagt
gaacgtctggtccagtatttgaatgcagtgcctgatggcaggatcctttctgtcgcagtg
aatgatgaaggttctcgaaacctggatgacatggcccggaaggcaatgaccaaactgggc
agcaaacacttcctacacctaggatttagacacccttggagttttctcactgtgaaagga
aatccctcttcttcagttgaagaccatattgaatatcatggacaccgaggctctgctgct
gctcgggttttcaaattgttcaagtcagaacatggggaatatttcaacgtttcttcatcc
agtgagtgggttcaagatgtggagtggactgagtggtttgatcatgataaagtgtctcca
actaaaggtggggagaaaatttcagacctccgagttgcttacccaggaaaaatctgcaac
cgtcccattgatatacaggccactacaatggatggagttaacctcagcatcgaggttgtc
tacaaaagaggccaggattataggtttgcttgttaccaccagggccaagcctgccagagc
taccgtgtgcggttcctctgtgggaagcctgtgaggcccaaactcacagtcatcatcgac
accaatgtgaatagcaccatcctgaacttggaggacgatgtgcggtcatggaaacctgga
gacaccctggttgttgccagtactgattactccatgtaccaggcagaagagttccaggtg
cttccctgcaaaacctgcaccgccaatcaagtcaaagtggcaggaaagccgttgtaccta
catatcggggaggagatggatggtgtggacatgagagcagaggttgggctcctgagccgg
aacatcgtggtgatgggagagatggaggacaagtgctacccctacagcaagcacatctgc
aacttctttgacttcgatacctttgggggccacatcaagcttgcactggggtttaaatca
gcacacatggagggcgtggagctaaagcacatggggcagcagctggtaggccagtaccca
attcacttccacctggctggagatgtggatgaaaagggaggctatgacccacccacgtac
atcagggacctttccattcaccacaccttctcacgctgtgtcaccgtccatggctccaat
ggcctgttgatcaaggatgttgtgggctataactcgttgggccactgcttcttcacagaa
gatgggccagaggaacgaaatactttcgaccactgccttggcctccttgtcaagtctgga
acgctccttccctctgaccgtgacagcaagatgtgcaagacaatcacagaggactcctac
ccagggtacatccccaaacccaggcaggactgcaatgctgtgtccaccttctggatggct
aaccccaacaacaacctcataaactgtgcagctgcaggatcggaggaaactggattttgg
ttcatttttcatcatgtaccaacaggcccctctgtgggaatgtactccccaggttattca
gaacacattccattaggaaaattctataacaatcgagcacattccaactaccgggctggc
atgatcatagacaatggagtcaaaaccactgaggcctctgccaaggacaagcggcccttc
ctatctatcatctcagcaagatacagccctcaccaggatgccgacccactgaagccccgg
gagccagccatcatcaagcacttcacagcctacaagaatcaagaccatggggcctggctg
cgtggtggggacgtttggctggacagttgccagtttgctgacaatggcatcggcctgacc
ctggccagtggtggaacattcccatatgatgatggctccaagcaggagataaagaacagc
ttgttcgttggtgagagtggcaacgtggggacagaaatgatggacaacagaatctggggc
cctggaggcttggaccacagtggaagaaccctccctattggccagaattttccaattaga
ggaatccagttctacgatggccccatcaacatccagaactgcacctttcgaaagtttgct
gccctggagggccggcacactagcgccctggccttccgcctgaacaacgcctggcagagc
tgccctcacaacaacgtgaccaacattgcctttgaggatgtcccgattacttccagagtg
ttcttcggagagcccgggccctggttcaaccagctggacatggatggggataagacgtcc
gtattccatgacgtcgatggctccgtgtctgagtaccctggctcctaccttaccaaggat
gacaactggctggtccggcatccagactgcatcaatgttcccgactggagaggggccatc
tgcagcggacgctatgcacagatgtacattcaagcctacaagaccagcaacctgcgaatg
aagattatcaagaatgacttccccacccaccctctttacctggagggggccctcaccagg
agcacccattaccagcagtaccagccagtcatcactctgcagaagggctacaccattcac
tgggaccagacggcacccgctgagctggccatctggcttatcaacttcaacaagggcgac
tggattcgagtggggttgtgctatccacgaggcaccacattttccatcctctcagatgtt
cacaatcgcctgctgaagcaaacatccaagacgggcacctttgtgaggaccttgcaaatg
gacaaagtggagcagagctatcctggcaggagccactattactgggatgaggactcaggg
ctgctgttcctaaagctcaaagcccagaatgagagggagaagtttgccttctgctccgtg
aaaggctgtgagagaataaagatcaaagctctgatccccaagaatgcaggtgtgagtgac
tgcacagccactgcctaccccaggtttgcagagagggccgtagtggacgtgcccctgccc
aggaagctcctcggcgcacagctgaagacaaaagaccactttctggaggtgaagatggaa
agttccaagcagcacttcttccaccttcggaacgactttgcttatattgaagtggacggg
aagaagtaccctagctcagaggatggcatccaggtggtggtgattgatgggagccaagga
cacgtggtgagccacatgagctttaggaactccattctgcagggcattccatggcagctt
ttcaactatgtggcagccgttcctgacaattccatagttctcatggtgtcaaagggaaga
tacatcaccagaggtccatggacgagagtgctggaaaagcttggggcagacaaaggtctc
aaactgaaagaaaagatggcatttgttggtttcaaaggcaccttccggcccacctgggtg
actctggagactgatgaccacacagccaagatcttccaagttgtgcccatccctgtggtg
aggaagaagaagctgtga
DBGET
integrated database retrieval system
